Methylovirgula ligni: CWB41_05270
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Entry
CWB41_05270 CDS
T05824
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
mlg
Methylovirgula ligni
Pathway
mlg03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
mlg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CWB41_05270
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mlg03400
]
CWB41_05270
Enzymes [BR:
mlg01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
CWB41_05270
DNA repair and recombination proteins [BR:
mlg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
CWB41_05270
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Motif
Other DBs
NCBI-ProteinID:
QAY97204
LinkDB
All DBs
Position
complement(1087143..1087958)
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AA seq
271 aa
AA seq
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MPFTLATWNINSVRLRIDLVGKFLADHAPDVLCLQETKCRDAEFPAAAFRKWGYEHIAIN
GQKGYHGVAIVSKIPFGIIDRRPFCDKGDARHISVTLAPTDERAFTLHNFYVPAGGDEPD
PGINPKFAHKLAFLDEMTAWIAADGIAGGDAVMVGDLNIAPLETDVWNHKALLKVVSHTP
IEVEKLGQVFAAGPWVDALRRYVPPEQKLYTWWSYRSPNWALADKGRRLDHIWTSQSLAP
ALTGMKILRESRGWERPSDHVPVLAHFDFGA
NT seq
816 nt
NT seq
+upstream
nt +downstream
nt
ttgcccttcaccctcgccacctggaatatcaattccgtccgcctgcgcatcgatctcgtc
ggcaaattcctcgcagaccacgcgccagatgttctctgcttgcaggaaacgaaatgccgc
gacgccgaattccccgcggcggccttccgcaaatggggctacgagcacatcgcgatcaac
ggccagaagggctatcacggcgtcgcaatcgtctcgaaaattccgttcggaattatcgac
cggcgccccttctgcgacaagggcgacgcccgccacatcagcgtgacactggcgccgacc
gatgagcgcgccttcacgctgcataatttctacgtgccggcgggcggcgacgagcccgac
cccgggatcaatccgaaattcgcccacaagctcgcctttctggacgaaatgacggcctgg
atcgcggcggatggcattgctggcggcgacgcggtgatggtcggcgacctcaatatcgcg
ccgctcgaaaccgatgtctggaaccacaaggcgctgcttaaagtggtgagccacacgccc
atcgaggtggaaaagctcggccaggtctttgccgccggcccctgggtcgatgccttgcgc
cgctacgtgccgcccgagcaaaagctttatacgtggtggagctatcgctcgcccaattgg
gccttggccgacaagggccgccggctcgaccatatctggacgagccaaagcctggcaccg
gcgctgaccggcatgaagattctacgcgagagccgcggctgggagcgcccctcggaccat
gtgccggtgctggcgcatttcgatttcggcgcctga
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