KEGG   Methylovirgula ligni: CWB41_05410
Entry
CWB41_05410       CDS       T05824                                 
Symbol
trbB
Name
(GenBank) P-type conjugative transfer ATPase TrbB
  KO
K20527  type IV secretion system protein TrbB [EC:7.4.2.8]
Organism
mlg  Methylovirgula ligni
Pathway
mlg02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:mlg00001]
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    CWB41_05410 (trbB)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:mlg02044]
    CWB41_05410 (trbB)
Enzymes [BR:mlg01000]
 7. Translocases
  7.4  Catalysing the translocation of amino acids and peptides
   7.4.2  Linked to the hydrolysis of a nucleoside triphosphate
    7.4.2.8  protein-secreting ATPase
     CWB41_05410 (trbB)
Secretion system [BR:mlg02044]
 Type IV secretion system
  Trb secretion system protein
   CWB41_05410 (trbB)
SSDB
Motif
Pfam: T2SSE Zeta_toxin FtsK_SpoIIIE AAA_16 TrwB_AAD_bind AAA_7 AAA_19 nSTAND3 ResIII DEAD ABC_tran AAA_22 CbiA DUF87 AAA_30 AAA_25 AAA_28 AAA_29 SLFN-g3_helicase DUF815 ATPase TsaE nSTAND_NTPase5 RsgA_GTPase GTP_EFTU PIF1 Mg_chelatase PduV-EutP AAA MMR_HSR1 Sigma54_activat AAA_18 MoCF_biosynth P-loop_TraG NACHT PCMT MobB Septin IstB_IS21 ABC_ATPase UvrD-helicase RNA_helicase TIP49
Other DBs
NCBI-ProteinID: QAY95237
LinkDB
Position
complement(1112112..1113125)
AA seq 337 aa
MTGTIVAVTPLHSEAFSRGARMLRTALGPAIATFLEDPSIVEVMLNPDGRLWIDRLSGGL
EDTGRTMSAADGERIVRLVAHHVGAEVHAGRPRVSAELPETGERFEGLLPPVVTAPAFAI
RKPAIAVFTLDDYVAAGTMTAGQAVLLREAVAARKNILVAGGTGTGKTTLTNALLAEIAG
TSDRVVLIEDTRELQCRAPNLVAMRTKDGVASLSDLVRSSLRLRPDRIPIGEVRGAEALD
LLKAWGTGHPGGIGTIHAGTALGALRRLEQLIQEAVVTVPKALLAETIDLVAVLRGRGSE
RRLSELATVAGLDPATGDYRVLSAGAGGEPMLPGEPS
NT seq 1014 nt   +upstreamnt  +downstreamnt
atgacggggacgatcgtggcggtcactccacttcattccgaggctttttcccgaggcgcg
cgcatgctgcgcaccgccctcggcccggcgatcgcaaccttcctcgaagacccttcgatc
gtcgaggtgatgctcaaccccgacggtcggctctggatcgaccggctgtcgggaggcctg
gaggataccggacggacgatgtccgccgccgatggcgagcggatcgttcgtctcgtcgcc
caccatgtcggcgccgaggtgcatgccggacgcccgcgcgtctcggccgagctacctgag
acgggagagcggttcgagggtcttctgccacccgtcgtcaccgcgccggccttcgccatc
cgcaagcccgctatcgcggtgttcaccctcgacgactacgtcgccgccggcaccatgacg
gccggccaagcggtcttgctgcgcgaggccgtcgccgcccgcaagaacatcctcgtcgcc
ggcggcaccggcaccggcaagacgacgctgaccaacgcgctgctcgccgagatcgccgga
acgagcgatcgcgtcgtgctgatcgaggatacgcgcgagctgcaatgccgggcgccgaac
ctggtcgccatgcgcaccaaggacggggtggcgtcgctctccgacctcgtgcgctcctcg
ctgcggctgcggcccgaccgcatcccgatcggcgaggtgcgtggggccgaggcgctcgac
ctcctgaaagcctggggtacggggcaccctgggggcatcggcacgatccacgccggcacc
gcgctcggcgcgctccgccgcctggaacagctcatccaggaagccgtcgtcaccgtcccc
aaggcgttgctcgccgagaccatcgatctcgtcgccgtgctgcgcggccgcggcagcgaa
cgccgcctctccgaactcgccaccgtcgccggtctcgatcccgccaccggcgattaccgc
gtcctgtccgccggggcgggcggcgaacccatgcttcctggagagccgtcatga

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