Methylovirgula ligni: CWB41_05765
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Entry
CWB41_05765 CDS
T05824
Name
(GenBank) excinuclease ABC subunit UvrB
KO
K03702
excinuclease ABC subunit B
Organism
mlg
Methylovirgula ligni
Pathway
mlg03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
mlg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CWB41_05765
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mlg03400
]
CWB41_05765
DNA repair and recombination proteins [BR:
mlg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CWB41_05765
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
CWB41_05765
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
AAA_22
AAA_16
UB2H
Microtub_bd
Kinesin
Motif
Other DBs
NCBI-ProteinID:
QAY95301
LinkDB
All DBs
Position
complement(1180249..1182735)
Genome browser
AA seq
828 aa
AA seq
DB search
MPKPPKKLSRPKAGKPELKPLGDHLAALLNPALTTNGGPPVGFAEAPATFDAAGGVAATA
ASLKDLLERGDPNLRGKTPWMPHRPPRPEKSEGGVEFRLISEYEPRGDQPAAIDELVAGI
NSGERDQVLLGVTGSGKTFTMAQVIARTQRPALVLAPNKTLAAQLYGEFKSFFPENAVEY
FVSYYDYYQPEAYVPRSDTYIEKESSINEQIDRMRHAATRALLERDDVIIVASVSCIYGI
GSVETYTAMTFTVKAGERIDQRQLIADLVALQYKRSGGDFYRGVFRVRGDTIELFPAHYE
DRAWRIRFFGDEIEGIVEFDPLTGQKTQDLEFIKVYANSHYVTPRPTLLQSIKGIKEELK
QRLAELYATGRLLEAQRLEQRTLFDLEMMEATGSCAGIENYSRYLTGRQPGEPPPTLFEY
LPDNALVFTDESHVTVPQIGAMYRGDFRRKATLAEYGFRLPSCLDNRPLRFEEWDAMRPP
SVHVSATPGKWEIERAGGIFVEQVIRPTGLIDPPVEVRPARAQVDDLLGEVREVAQRGYR
SLVTVLTKRMAEDLTEYLHEHGVRVRYMHSDIDTLERIEIIRDLRIGAFDALIGINLLRE
GLDIPECGLVAILDADKEGFLRSETSLVQTIGRAARNIDGRVILYADQITGSMQRAMAET
SRRREKQEQFNVENGITPESIKRGIQNILGSIAERDHVTVDAGMAQAGNLIGHNFKATMA
DLEREMRDAAADLNFEKAARLRDEIKRLQAVELAISDDPLATQSDVEREAGGYRGPRPFG
DAANMPASRPHKPTDSEMGPHNFGGGEAKPRSSAGKGGTRAWKGKRRG
NT seq
2487 nt
NT seq
+upstream
nt +downstream
nt
atgcccaaaccgccgaaaaaactcagccgccccaaagccggaaagcccgagctgaagccg
ctcggcgaccatctcgccgcgctgctcaatcctgccttgacgaccaacggcgggcctcct
gtgggctttgccgaggcacccgcgacgttcgacgccgcaggcggtgtcgcggcgaccgcc
gcctcgctgaaggatctgctcgagcggggcgaccccaatctgcgcggcaagaccccgtgg
atgccgcatcggccgccgcgcccggagaagtcggagggcggcgtcgagttcagactcatc
tcggaatatgagccgcgcggcgaccagccggcggcgatcgatgagcttgtggccggcatc
aacagcggcgaacgcgaccaggtgctgctcggcgtcaccggctcgggcaagacctttacg
atggcgcaggtcatcgcccgcacccagcgcccggctttggttctcgcgcccaacaagacg
ctggcggcgcagctctacggcgagttcaagagcttcttcccggagaacgcagtcgaatat
ttcgtctcctattacgactattaccagccggaagcctatgtgccgcgctcggacacctat
atcgagaaggaatcctcgatcaacgagcagatcgaccgcatgcgtcacgccgcgacgcgc
gcgctgctcgaacgcgacgacgtgatcatcgtcgcctccgtctcctgcatctatggtatc
ggctcggtcgagacctacacggcgatgaccttcaccgtgaaggcgggcgagcgcatcgat
cagcggcaattgatcgccgatctcgtcgccttgcaatacaagcgctcgggcggcgacttt
tatcgcggcgtcttccgcgtgcgcggcgatacgatcgagcttttccccgcccactatgag
gatcgcgcctggcgcatccgtttcttcggcgacgagatcgaaggaatcgttgaattcgat
ccgctgaccgggcagaagacgcaggacctcgaattcatcaaggtctatgcgaattcgcat
tatgtgacgccgcgcccgacgctgctgcaatcgattaaaggcatcaaggaggaattgaag
cagcgcctcgccgagctttatgccaccgggcgcctgctcgaagcgcaaaggctcgaacaa
cgcacgctcttcgatctcgagatgatggaggcgaccggctcctgcgccggcatcgagaat
tattcgcgctatctcaccggccgccagccgggcgagccgccgccgacgctgttcgaatat
ctgcccgacaatgcgctcgtcttcaccgacgagtcgcatgtcaccgtcccgcagatcggc
gccatgtatcgcggcgactttcgccgcaaggcgacgttggccgaatatggcttccgcctg
ccgtcctgcctcgacaaccggccgctgcgcttcgaggaatgggacgcgatgcggccgcca
tctgtccatgtctccgcgacccccggcaaatgggagatcgaacgcgccggcggcatcttt
gtcgaacaggtgatccgcccgaccgggctcatcgatccgccggtcgaggtgcgccccgcg
cgggcacaagtagatgatcttcttggcgaggtgcgcgaggtcgcccagcgcggctatcgc
tcgctcgtcaccgtcctcaccaagcgcatggccgaggatctcaccgaatatctgcatgag
catggcgtgcgcgtgcgctacatgcattccgacatcgacacgctggagcggatcgagatc
atccgcgatctgcgcatcggcgctttcgatgcgctcatcggcatcaacctgctgcgcgag
ggtctcgacattcccgaatgcgggctcgtcgccatcctcgacgcggataaggaaggtttt
ctgcgcagcgagacctcgctggtgcagacgatcggccgcgccgcgcgcaatatcgatgga
cgggtgatcctctacgccgatcagatcaccggctcgatgcagcgcgctatggccgagacc
agccggcggcgtgaaaagcaggagcagttcaatgtcgagaacggcatcacgccggaatcg
atcaagcgcggcattcagaacatcctcggctccatcgccgagcgcgaccatgtgacggtc
gatgccggaatggcgcaggcgggcaatctcatcggccataatttcaaggcgacgatggcg
gacctcgaacgcgagatgcgcgatgcggcggcggacctcaatttcgagaaggcggcgcgg
ctgcgcgacgaaatcaagcggctacaagcggtggaactcgcgatctccgacgatccgctg
gcgacgcagtccgatgtcgaacgcgaggcgggcggctaccgcggcccacggcccttcggc
gatgctgcgaatatgccggcgagccggccgcacaagccgaccgattccgaaatggggccc
cataatttcggcggcggcgaagccaagccacgctcgtctgcgggcaaaggcggcacgcgg
gcgtggaagggcaagaggcgggggtaa
DBGET
integrated database retrieval system
