Methylovirgula ligni: CWB41_06170
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Entry
CWB41_06170 CDS
T05824
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
mlg
Methylovirgula ligni
Pathway
mlg03030
DNA replication
mlg03430
Mismatch repair
mlg03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mlg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CWB41_06170
03430 Mismatch repair
CWB41_06170
03440 Homologous recombination
CWB41_06170
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mlg03032
]
CWB41_06170
03400 DNA repair and recombination proteins [BR:
mlg03400
]
CWB41_06170
Enzymes [BR:
mlg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CWB41_06170
DNA replication proteins [BR:
mlg03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CWB41_06170
DNA repair and recombination proteins [BR:
mlg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CWB41_06170
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_gamma3
DUF3646
DNA_pol3_delta2
DNAX_ATPase_lid
AAA
AAA_22
AAA_5
RuvB_N
AAA_14
AAA_30
AAA_assoc_2
AAA_16
AAA_18
RCF1-5-like_lid
AAA_19
nSTAND3
Cdc6_lid
AAA_28
DEAD
SRP54
ORC-CDC6-like
AAA_24
TsaE
Motif
Other DBs
NCBI-ProteinID:
QAY95372
LinkDB
All DBs
Position
complement(1256756..1258567)
Genome browser
AA seq
603 aa
AA seq
DB search
MAEDHSAEPSLLPKGHEAIAPTPYRVLARKYRPANFDDLIGQEAMVTTLSNAFDLGRIHQ
AYILTGVRGVGKTTTARILARAFNYELPARDGKPAINAPTIHMPELGVHCQAIIDSRHVD
VIEMDAASHTGIDDVREIIDNARYRPVLARTKVYIIDEVHMLSKQAFNGLLKTLEEPPDH
VKFIFATTEIEKVPVTVRSRCQRFDLRRIEADRLVAHLSGICVKEEIAAEPEALASIARA
AEGSVRDALSLLDQAIAHAKGSLRVEVKAEDLRQMLGLADRGRLIELFADVMRGDIAAAL
AAMKALYESGADPQRLLGELAEFTHIVTRLKLVPETAKDPALSEVERVRGAEFAQSLSLP
VLTRAWQLLLKGLNEIKDSPRPLAAADMILVRLAYAADLPTPDEALRRLGNLPQATTAAS
SPSPARDSAPAGSSASLVSRGTGQAVRAAPAPQPERTEPGLRLARFEDVVAQAAAARDIQ
LKMALERDVRLVRFEEGAIEFALAPGASPQLAQTLMRRLQEWTGRRWMVAISSEAGTPSL
KEQAEAAAAASLHGVRADPLVRAVMDVFPGAEIVAVREAEPAENATAAEDIAYIDSAPPE
DDL
NT seq
1812 nt
NT seq
+upstream
nt +downstream
nt
atggccgaggatcacagcgccgaaccctctcttctgcccaaaggtcacgaggccatcgcg
ccgacgccctatcgggtgctcgcgcgcaagtaccggccggcgaatttcgacgatctcatc
ggccaggaggcgatggtcacgaccttgtcgaatgccttcgatctcggccgtatccaccaa
gcctatatcctgaccggcgtgcgcggggtcggcaagacgacgacagcccgcatcctcgct
cgcgccttcaattacgagctgccggcgcgcgacggcaagccggcaatcaacgcgccgacg
atccacatgccggagcttggcgtgcattgccaggcgatcatcgattcccgtcatgtcgac
gtgatcgagatggacgcggcctcgcataccggcatcgatgacgtccgcgagatcatcgat
aatgcgcgctatcgtccggtccttgcgcgcaccaaggtctatatcatcgacgaagttcac
atgctctcgaaacaggccttcaacggcctgttgaagacgctggaagagccgccggaccat
gtgaaattcatcttcgccacgaccgagatcgagaaagtcccggtgacggtgcgctcgcgc
tgccagcgtttcgatctgcgccgtatcgaggcggaccggctcgtcgctcacctttcgggc
atttgcgtcaaagaggagatcgccgccgaacccgaggcactcgcctcgatcgcgcgggcg
gcggaaggctccgtgcgcgatgcgctgtcgctgctcgaccaggcgatcgcccatgccaag
ggcagcctgcgcgtcgaagtcaaagccgaagacctgcggcagatgctcggccttgccgac
cgcgggcgcctgatcgagcttttcgctgatgtgatgcgcggcgatatcgccgccgccctc
gccgcgatgaaggcgctctatgagtccggcgccgatccccagcgcctgctcggtgagctt
gccgaattcacccatatcgtgacccggctgaagctggtgccggagacggcgaaggacccg
gcactgagcgaggtggagcgcgtgcgcggcgccgaattcgcgcaaagcctttctttgccg
gtgctgacgcgcgcctggcaattgctgctgaagggtttgaacgagatcaaggattcgccg
cgcccgcttgccgccgccgatatgattctcgtgcggctcgcttacgccgccgatctgcca
acgccggacgaggcccttcgccggctcggcaacctgccgcaagcgacgaccgcggcttcc
tctccaagtcccgcacgcgactccgcgcctgctggcagctcggcttcgttggtgtcgcgc
ggaaccggtcaggctgtccgcgccgcgccggcaccgcagccggagcgcactgaaccaggg
ctgcggctcgcgcgcttcgaggatgtcgtggcgcaagccgcggccgcccgcgacattcaa
ttgaagatggcgctggagcgcgacgtccgcctcgtgcgcttcgaggaaggcgcgatcgaa
ttcgcgcttgctcccggtgcctcgccgcagctcgcgcaaacgctgatgcggcgattgcag
gaatggaccggccggcgctggatggtcgcgatttctagcgaggctggcacgccgagtttg
aaagagcaggccgaggccgccgcagcggcgagcctgcacggggtgcgcgccgacccgctg
gtgcgcgcggtgatggacgtttttcctggcgccgagatcgtcgcggtgcgcgaggcagag
ccggcggaaaacgcgacggcggccgaagacatcgcctatatagattcggcgcctcctgaa
gacgatctgtaa
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