Methylovirgula ligni: CWB41_06490
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Entry
CWB41_06490 CDS
T05824
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
mlg
Methylovirgula ligni
Pathway
mlg00521
Streptomycin biosynthesis
mlg00523
Polyketide sugar unit biosynthesis
mlg00541
Biosynthesis of various nucleotide sugars
mlg01100
Metabolic pathways
mlg01110
Biosynthesis of secondary metabolites
mlg01250
Biosynthesis of nucleotide sugars
Module
mlg_M00793
dTDP-L-rhamnose biosynthesis, glucose-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
mlg00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
CWB41_06490 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
CWB41_06490 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
CWB41_06490 (rfbC)
Enzymes [BR:
mlg01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
CWB41_06490 (rfbC)
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Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
QAY95424
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All DBs
Position
complement(1326397..1326951)
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AA seq
184 aa
AA seq
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METTTFPISGPLLLRPKRIEDSRGFFSETYNERLFREALGDVRFVQDNQSLSTQAGTIRG
LHFQSPPAEQGKLVRVLRGAVFDVAVDIRRGSPTYGKFVSATLSAENWTQLWVPAGFAHG
FCTLEPDSEVLYKVTSYYSRGHDLGLAWDDPELDIPWPVAPGRAVLSDKDHAHPMLRDLP
AYFS
NT seq
555 nt
NT seq
+upstream
nt +downstream
nt
atggaaacgacgactttccccatttccggtccattgctgttgcgaccgaaaagaatcgaa
gattcgcgcggcttcttttcggaaacatataacgaaagacttttccgcgaggcgctcggc
gacgtccgttttgttcaggacaatcaatcgctatcgacgcaggccgggacgatccgcggg
ctgcatttccaatcgccgccggctgagcagggcaagctcgtgcgcgttttgcgcggcgcg
gtattcgacgtcgcggtcgatattcggcgcgggtccccgacctacggcaaattcgtctcg
gcgaccctgagcgcggaaaattggacgcagctctgggttccggccggcttcgcgcatggc
ttctgtacgctcgaacccgatagcgaagtgctctacaaggtgacgtcttattattcccgc
gggcatgaccttggccttgcctgggacgatcccgaactggatattccctggcccgtggca
ccaggtcgcgccgtcctctccgacaaggaccatgctcatcccatgctcagggatctgccg
gcttatttttcctag
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