Methylovirgula ligni: CWB41_06500
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Entry
CWB41_06500 CDS
T05824
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
mlg
Methylovirgula ligni
Pathway
mlg00521
Streptomycin biosynthesis
mlg00523
Polyketide sugar unit biosynthesis
mlg00525
Acarbose and validamycin biosynthesis
mlg00541
Biosynthesis of various nucleotide sugars
mlg01100
Metabolic pathways
mlg01110
Biosynthesis of secondary metabolites
mlg01250
Biosynthesis of nucleotide sugars
Module
mlg_M00793
dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
mlg00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
CWB41_06500 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
CWB41_06500 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
CWB41_06500 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
CWB41_06500 (rfbB)
00525 Acarbose and validamycin biosynthesis
CWB41_06500 (rfbB)
Enzymes [BR:
mlg01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
CWB41_06500 (rfbB)
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GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
RmlD_sub_bind
3Beta_HSD
Polysacc_synt_2
NAD_binding_4
adh_short
KR
Sacchrp_dh_NADP
NAD_binding_10
Motif
Other DBs
NCBI-ProteinID:
QAY95426
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Position
1328656..1329717
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AA seq
353 aa
AA seq
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MMKRFLVTGGAGFIGSAVVRHLVGDLGHQVCVLDKLTYAGNLENLEPIARSARFHFARLD
ICDVAAVRALFAEFQPEVVMHLAAESHVDRSIDGPAAFIQTNVVGTFHLLDVAHDYWQSL
PPDGRAGFRFHHVSTDEVFGSLHDEGLFSETSPYQPNSPYSASKAASDHLVRAWNHTYGL
PAVASNCSNNYGPYHFPEKLIPLIILNGLEGKPLPIYGQGDNIRDWLYVEDHARALVLVA
EQGRVGETYNIGGSSERTNLQVVEAVCDLVDEMAPDAAIGPRRELIRFVADRPGHDKRYA
IDAGKIKRELGFTPRESFETGLRKTVRWYLDNEAWWRRLRTSVYRGERLGHVA
NT seq
1062 nt
NT seq
+upstream
nt +downstream
nt
atcatgaagcgttttttggtgacgggcggcgcggggttcatcggttctgccgtcgtgcgg
cacctcgtcggggatctcggccatcaagtttgcgtgctcgataaattgacctacgcgggc
aatctcgaaaatcttgagcccatcgcccggagcgcgcgttttcattttgcccggctcgat
atttgcgacgtcgccgccgtacgcgcgctcttcgccgagttccagcccgaagtcgtgatg
catctcgcggccgagagccacgtcgatcgctccatcgacgggccggcggcctttatccag
acgaatgtcgtgggcacgtttcatcttctcgatgtggcccatgattattggcaaagcttg
ccgccggacggcagggcggggttccgctttcatcatgtttcgaccgacgaggttttcggt
tcgctccatgacgaggggcttttctccgagacgagcccctatcagccgaactcgccctat
tcggcatcaaaggccgcgtccgatcatttggtgcgcgcatggaaccacacttatgggctt
cctgcggtggcgtcgaattgttcgaataattatggcccttatcatttccccgagaaattg
attccgctcatcatcctcaacgggcttgagggcaagccgctgccgatctatggccagggc
gacaacattcgcgactggctttacgtggaagatcacgcgcgcgccctggtcttggttgcg
gagcaagggcgcgtcggcgaaacctacaatattggcgggtcgagcgagcgcaccaatctg
caagtggtcgaggccgtctgcgatctggtcgatgagatggcgccggatgccgcgatcggc
ccgcgtcgggagctgatccggttcgtcgccgaccgcccaggccacgacaagcgctacgcc
atcgatgccggcaagatcaaacgcgaactcggcttcacgccgcgggaaagttttgagacc
ggcctgcgcaagacagtgcgctggtatctggacaacgaagcctggtggcggcgcctccgc
accagcgtttatcgcggcgagcgtttgggtcacgtcgcatga
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