Methylovirgula ligni: CWB41_09045
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Entry
CWB41_09045 CDS
T05824
Symbol
addB
Name
(GenBank) double-strand break repair protein AddB
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
mlg
Methylovirgula ligni
Brite
KEGG Orthology (KO) [BR:
mlg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mlg03400
]
CWB41_09045 (addB)
Enzymes [BR:
mlg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CWB41_09045 (addB)
DNA repair and recombination proteins [BR:
mlg03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
CWB41_09045 (addB)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDDEXK_1
DUF7539
KIX
Motif
Other DBs
NCBI-ProteinID:
QAY95860
LinkDB
All DBs
Position
complement(1884042..1887164)
Genome browser
AA seq
1040 aa
AA seq
DB search
MPRKNVFTIAPGAPFLECFSAALLDGRIVPGFSRACGALDMADATIYVPTQRAARALGEE
FARALGRPATLLPRILPLGGLEATETDLLFAAPGFDAPGTALPQAAGDIWRRMQLGRLVH
IWAKALHGAIVSIGADGKHITDSREPCLVGTSTTDAWHLAGELAGLIDELIIEDVAWEKL
DPLVLPEFDRYWRVTLDFLNIAIAQWPSILAKHNLVDAARRHVLLITAQIAEIATGRSKG
PVIAIGSTGTNRATAKLLAALAGAPQGAVVLPGLDLDLDERAWARVNTEDAGDPGFSHPQ
AALRRLLPVLGVSRAEVTELAAPPAHLVSRARVLSEALRPADTTEEWQAFRDDPAFAEIG
PALADVSLIEAADEREEALALAIALREVLETPGATAALVTPDRDLARRVGAELTRFGIEI
DDSAGEPLSATAAGTLALRAAEAAKAEDAASLVALLAHPAARFGLSRAEILERAPLFEIG
LLRQETPLSSYATRAAAVAGAREAAKDRFAHPAQKALGDADWAGIADLLDRLDAALAPLK
AIAGSRDLQPWIAAHRAALAEITRSEDAALSEDAVALDDLFDALLQANQPDLLFDAEGYA
IFLAEVMGEKVLRRARRTHPRLKIFGLLEARLMPADVMLLGGLDEGVWPPQAQSDAFLNR
PMRHALGLTPPERRIGQTAHDFVMALGHKRVILSRARKRDGTPMVESRFVQRLTALAGNA
FKNCRERGEYYLHLARAIDRPGEARPPIGRPEPKPPLALRPQRLSVTRIETLRRDPYSIY
AEYCLNLRELPQPAEIGERRNIGSLLHAVLEKFGERFPSGALPADAAAVFSALLEDSFAS
ERADPDFSAFAWPRLKEAARFYLDFEHRRRADLVRLDVERNGKIAIPLDDGTTFTLSATA
DRIEHHSDGRVSLVDYKTGKPPGIEEVRVGFAPQLTLEAAMVARGGFDLPLGTNVAEAIY
VKLFDKNGGDERPLLFKKSGETLSEVSEKHFVELVTLLNQFRDANTCYPSRPYPKFAVRY
SAYDHLARVKEWAAGREDGA
NT seq
3123 nt
NT seq
+upstream
nt +downstream
nt
atgccccgaaaaaacgtcttcaccatcgcgccgggcgcgccctttctcgaatgtttctcc
gccgcgctgctcgacggccgcatcgtgccgggtttttcgcgtgcatgcggcgccttggac
atggcggacgcgacgatttatgtgccgacgcagcgcgccgcgcgcgcgctgggcgaggaa
ttcgcccgcgccctcgggcggccggcgaccctcctgccccgcatcctgccgctcggcggc
ctcgaggcaacggaaacggatctgcttttcgccgctcccggtttcgatgcgccgggcacc
gcgctgccgcaagcggcgggtgatatctggcggcggatgcagcttggccgcctcgtccat
atctgggccaaggcactgcacggcgccatcgtctcgatcggcgcggatggcaaacacatc
accgattcgcgcgagccatgtcttgtcggcacatcgaccaccgacgcctggcatctggca
ggcgagcttgccggcctgatcgacgaactgatcatcgaggatgtcgcctgggaaaagctc
gatccgctggttctgccggagttcgaccgctattggcgcgtgacgctcgactttctcaac
atcgccatcgctcaatggccgtcgattctcgccaaacataatctcgtcgatgccgcgcgg
cggcatgttctgctcattacggcgcagatcgcggagatcgcgaccgggcgaagtaaaggc
ccggtgatcgccatcggctcgaccggcaccaatcgcgccaccgcgaaactgcttgcggcg
ctggccggggcgccgcaaggcgctgtcgtcctgccggggctcgatctcgacctcgacgaa
cgcgcctgggcgcgggtcaacaccgaggatgcgggcgatcccggcttcagccatccgcaa
gcggcgctgcgccggctgctgccggttcttggcgtctcacgcgccgaggtgacggaactc
gccgcaccgccggcacatctcgtcagccgcgcgcgcgttctttccgaggccctacgtccc
gccgacacgaccgaggaatggcaggcctttcgcgacgatcccgctttcgcagaaatcggc
ccggcgctcgccgacgtcagcctgatcgaagcggccgacgagcgcgaagaggcgctggcg
ctcgccatcgccctgcgcgaggttctggagacgccgggcgcaacggcggcgctggtaacg
cccgaccgcgaccttgcccgccgcgtcggcgcggaactgacccgcttcggcatcgagatc
gacgattccgctggcgaacctctcagcgccaccgccgccggcacactggcattacgcgcc
gccgaagctgccaaggcggaagatgcggcaagccttgtcgctttgcttgcgcatccagcc
gctcgcttcggcctgtcgcgcgcggagattctggaacgcgcgccgctttttgagatcggg
cttttgcggcaggaaacgcctttgtcgagctatgcgacacgcgccgccgctgtcgccggc
gcacgcgaggcggccaaagaccgtttcgcccatccggcgcaaaaggcgcttggcgatgcg
gattgggccgggattgccgatcttctcgaccggctcgacgcggcgctggcgcctttgaaa
gcaatcgcgggttcgcgcgacttgcagccctggatcgcggcgcatcgggccgcgctcgcc
gagatcacgcgcagcgaagacgctgcgctcagcgaagacgccgtggcgctcgatgatctt
ttcgacgcgcttctgcaagccaatcaaccggaccttcttttcgacgcggaaggctatgcg
atctttcttgccgaggtgatgggcgagaaggtactgcggcgggcgcggcgaacacatccg
cgcctcaagattttcggcttgctcgaagcccggctcatgcctgcggatgtaatgctgctt
ggcgggctcgacgaaggcgtctggccgccgcaggcgcagagtgatgcctttctgaaccgg
ccgatgcgccatgcgctgggtctgacgccgcccgagcgccgcatcggccagacggcgcat
gatttcgtgatggctctcggccataagcgcgtgatcctgagccgtgcccgcaaacgcgac
ggcactccgatggtcgaatcgcgctttgtgcagcgcctcaccgcgctggcgggcaacgca
ttcaagaactgccgcgaacgcggcgaatattatctgcatctcgcccgcgccatcgacagg
ccgggcgaggcgcgcccgcccatcggccggcccgaaccgaaaccaccgctggcgctccgc
ccgcaacggctcagcgtgacacggatcgaaaccctgcggcgcgatccctattcgatttac
gccgaatattgcctgaacctgagggagctgccgcagccggccgagatcggcgaacggcgc
aacataggctccttgctgcacgcggtgctggaaaaattcggggaacgcttcccgagcgga
gccttgccggcggatgccgcggcggttttttccgcgctgcttgaagacagcttcgcgagc
gagcgcgccgatcccgatttcagtgccttcgcctggccgcgcctcaaggaagcggcgcgc
ttctatctcgacttcgagcaccgccgccgtgcggacctcgtccggctcgatgtcgagcgc
aacggcaagattgcgatcccgcttgacgatggcacgacattcaccctgtccgccacggcc
gaccggatcgagcatcattccgatggccgcgtaagccttgtcgattacaagactggcaag
ccgcccggcatcgaggaagtgcgcgtcggcttcgcaccgcaattgacgctcgaggcggcg
atggtcgcgcggggcggcttcgacttgcccctcggcaccaatgtcgccgaagcgatctat
gtgaagctctttgataagaacggcggcgacgaacgcccgctgcttttcaagaagagcggc
gaaacgctgagcgaagtctcggaaaagcacttcgtcgaactcgtcacgctgctcaatcag
tttcgcgatgcgaatacctgctatccatcgcggccctatccgaaattcgccgtgcgctac
agcgcctacgatcaccttgcccgcgtcaaggaatgggcggccggccgcgaggatggcgca
tga
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integrated database retrieval system
