Methylovirgula ligni: CWB41_09680
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Entry
CWB41_09680 CDS
T05824
Name
(GenBank) uracil-DNA glycosylase
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
mlg
Methylovirgula ligni
Pathway
mlg03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
mlg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CWB41_09680
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mlg03400
]
CWB41_09680
Enzymes [BR:
mlg01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
CWB41_09680
DNA repair and recombination proteins [BR:
mlg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
CWB41_09680
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
QAY95962
LinkDB
All DBs
Position
2010093..2010911
Genome browser
AA seq
272 aa
AA seq
DB search
MPDEASPAALTRLLRWYADMGVDLAVDDMPHDRFAESQNLERPPSVQPAPMPAPMPRRPA
TVPARVPMSAPPLSPPFAGVAEAVKAQTLEDLRAELLAFEGCGLKATATQLVFADGNPEA
DIMFVGEAPGADEDRIGRPFVGRAGQLLDKMLAAIGLDRTKVYIANVVPWRPPGNRTPTP
LETGVCLPFTRRQIELVAPKILICLGAPSMQTLLGIKEGIMRSRGRWVDYDRGGTIIPAM
AMLHPAYLLRQPSHKKFAWQDLRELAKKIDKI
NT seq
819 nt
NT seq
+upstream
nt +downstream
nt
atgcctgacgaggcatcgccggcggcactgacgcggctgttgcgctggtacgcagatatg
ggcgtcgatctcgccgtcgacgacatgccgcatgatcgcttcgccgagtcacaaaatctt
gaacggccgccgagcgtccagcccgcgcccatgcccgcgcccatgcctcgccgcccggcg
acggtcccggcgcgcgtaccgatgagtgcgccgccattgtcaccgccgttcgccggcgtc
gcggaagcggtgaaggcccagaccctggaggatttgcgggcggagcttctcgccttcgag
ggctgcggcctgaaggcgacggcgacgcagcttgttttcgccgacggcaatccggaagcc
gacatcatgttcgtcggcgaggcgccgggcgcggacgaggatcgcattggccggcctttc
gtcggccgcgccgggcaattgctcgacaagatgctcgccgccatcggcctcgaccgcacc
aaggtctacattgccaatgtcgtgccctggcggcctccgggcaaccggacgccgacgccg
ctggagacgggtgtctgcctgccgttcacgcgccgccagatcgagctggtcgcgccgaaa
atcctcatctgcctcggggcgccttcgatgcagacgctgctcggcatcaaggaagggatc
atgcgcagccgcggccgctgggtggattatgatcgcggcggcacgatcatcccggccatg
gccatgctgcatccggcctatctgctgcgccagccctcgcacaagaaattcgcctggcag
gacctgcgcgaactggccaaaaagatcgataagatctga
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