Mycobacterium liflandii: MULP_02129
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Entry
MULP_02129 CDS
T02444
Name
(GenBank) hydrolase (metallo-beta-lactamase superfamily)
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
mli
Mycobacterium liflandii
Pathway
mli03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mli00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MULP_02129
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mli03019
]
MULP_02129
Messenger RNA biogenesis [BR:
mli03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
MULP_02129
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_J_b_CASP
RNase_J_C
Lactamase_B_2
RMMBL
Lactamase_B
Anti-Pycsar_Apyc1
Motif
Other DBs
NCBI-ProteinID:
AGC62017
UniProt:
L7V7A6
LinkDB
All DBs
Position
2305438..2307114
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AA seq
558 aa
AA seq
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MNEELPPPAPLASGGLRVTALGGINEIGRNMTVFEHLGRLLIIDCGVLFPTHDEPGVDLI
LPDLRHIEDRLDDIEALVLTHAHEDHIGAIPFLLRLRPDIPIVGSKFTLALVAAKCREYR
IKPVFVEVAEGQSSRHGVFECEYFAVNHSVPDALAIAVYTGAGTVLHTGDIKLDQLPLDG
RPTDLPGMSRLGDAGVDLFLCDSTNSEIPGVGPSESEVGPTLHRLIRGADGRVIVACFAS
NVDRVQQIIDAAVALGRRVSFVGRSMVRNMGVARELGFLRVDDSDVIDIGAAEMMPPEQV
LLITTGTQGEPMSALSRMSRGEHRSITLTAGDLIVLSSSLIPGNEEAVFGVIDSLSKIGA
RVVTNAQARVHVSGHAYAGELLFLYNGVRPRNVMPVHGTWRMLRANAKLAASAGVAPESI
LLAENGVSVDLVGRKASIAGAVPVGKMFVDGLITGDVGEITLGERLILSSGFIAVTVVVH
RGTGRPAAVPHLHSRGFSEDPKALEPAVRKVEAELESLVAANVTDPIRIAQGVRRTVGKW
VGETYRRQPLIVPTVIEV
NT seq
1677 nt
NT seq
+upstream
nt +downstream
nt
gtgaacgaagaacttcccccaccagcgccgttggcttccggggggttgcgggtcaccgcg
ctgggcggcatcaacgaaatcggccgcaacatgacggtgttcgagcatctggggcggctg
ctgatcatcgactgcggcgtgctgttcccgacccacgacgagccgggcgtcgatttgatc
ctgcccgacctgcgccatatcgaggaccgcctggacgatatcgaggcgctggtgctcacg
cacgcgcacgaggaccacatcggggctatcccgttcttgctcaggttgcgtccggacatc
cccatcgtcggatccaagttcaccctggcgctggttgcggccaagtgccgcgaataccgg
atcaaaccggtgttcgtcgaggtcgcggaggggcagagcagtcgacacggcgtgttcgag
tgcgaatacttcgccgtcaaccactccgtgccggatgcccttgcgatcgccgtctacacc
ggcgcgggaaccgtgctgcacaccggtgatatcaagcttgatcagctgcccctcgacggt
cgccccaccgacttaccgggcatgtcgcgcctcggcgatgccggtgttgacctgttcctg
tgtgattcgaccaactccgagatccccggtgtcgggccctccgaaagtgaggtgggtccc
accctgcaccggctgatcaggggtgccgacggtcgggtcatcgtggcgtgtttcgcctca
aacgtcgaccgggtgcagcagatcatcgacgccgcggtggcactgggccggcgagtttcc
ttcgtggggcgctccatggtgcgcaacatgggcgtcgccagggaactgggctttctgcgg
gtggacgattccgatgtgatcgacatcggtgccgccgagatgatgccgcccgaacaggtg
ttgttgattaccaccggcacccagggcgaaccgatgtcggcgttgtcgcggatgtcgcgc
ggtgagcaccgcagcatcacgctgactgccggtgatctcatcgttttgtcgtcgtcgctg
atccccggcaatgaggaagcggttttcggcgtcatcgactcgctctccaagatcggcgcc
agggtggtcaccaacgcccaagcccgggtgcacgtttccggccatgcctacgccggtgag
ctgttgttcctgtacaacggggtgcgaccacgcaacgtcatgccggtgcacggaacctgg
cgaatgcttcgggccaacgccaagctggccgccagcgccggggtggcgccggagtcaatc
ctgttggcggagaacggggtcagcgtcgatctggtggggcgcaaggcttcgatcgccggt
gcggtcccggttggcaagatgttcgtcgacggtttgatcaccggcgatgtcggcgaaatc
accctgggcgagcggctgatcctgtcgtcgggttttatcgcggtgaccgtggtcgtgcac
cggggcaccgggcgtcccgcggctgtgccgcatctgcattcgcgtggattctccgaagac
cccaaggcgctggagcccgccgtgcgcaaggtcgaagccgagctggaatctctggttgcc
gccaacgtcaccgatccgatcaggatcgcgcagggggtgcgccgcaccgtcggaaaatgg
gtcggtgagacctaccgccggcagccgctgatcgtgcccacggtcatcgaagtctga
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