Mycobacterium liflandii: MULP_03253
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Entry
MULP_03253 CDS
T02444
Symbol
dnaE
Name
(GenBank) DNA polymerase III, alpha subunit, DnaE1
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
mli
Mycobacterium liflandii
Pathway
mli03030
DNA replication
mli03430
Mismatch repair
mli03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mli00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
MULP_03253 (dnaE)
03430 Mismatch repair
MULP_03253 (dnaE)
03440 Homologous recombination
MULP_03253 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mli03032
]
MULP_03253 (dnaE)
03400 DNA repair and recombination proteins [BR:
mli03400
]
MULP_03253 (dnaE)
Enzymes [BR:
mli01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
MULP_03253 (dnaE)
DNA replication proteins [BR:
mli03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
MULP_03253 (dnaE)
DNA repair and recombination proteins [BR:
mli03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
MULP_03253 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DNA_pol_IIIA_C
Motif
Other DBs
NCBI-ProteinID:
AGC62965
UniProt:
L7V8T6
LinkDB
All DBs
Position
complement(3535305..3538847)
Genome browser
AA seq
1180 aa
AA seq
DB search
MSGSSSRSFVHLHNHTEYSMLDGAAKITPMLAEVERLDMPAIGMTDHGNMFGASEFYNSA
TKAGVKPIIGVEAYVAPGSRFDTRRITWGDPSQKGDDVSGSGSYTHLTMVAENATGLRNL
FKLSSLASFEGQLGKWSRMDAELVAEHAEGIIATTGCPSGEVQTRLRLGHDREALESAAK
WREIFGADNYFLELMDHGLSIERRVREGLIEIGRKLDIPPLATNDCHYVTRDAAHNHEAL
LCVQTGKTLSDPNRFKFDGDGYYLKSAAEMRQLWDDDIPGACDSTLLIAERVQSYADIWT
PRDRMPIFPVPEGHDPASWLHHEVMAGLRRRFPSGLGQDYIDRAEYEIKVICDKGFPSYF
LIVADLINYARSVDIRVGPGRGSAAGSLVAYAMGITNIDPIPHGLLFERFLNPERPSAPD
IDIDFDDRRRGEMVRYAADKWGQDRVAQVITFGTIKTKAALKDSARIHYGQPGFAIADRI
TKALPPPIMAKDIPLSGITDPAHERFKEAAEVRGLIETDPDVRTIYQTARGLEGLIRNAG
VHACAVIMSSEPLTEAIPLWKRPQDGAIITGWDYPSCEAIGLLKMDFLGLRNLTIIGDAI
ENIKANRGIDLDLESLPLDDKPTYELLGRGETLGVFQLDGGPMRDLLRRMQPTEFNDIVA
VLALYRPGPMGMNAHNDYADRKNNRQAVKPIHPELEEPLREILSETYGLIVYQEQIMFIA
QKVASYTMGKADALRKAMGKKKLEVLEAEYKGFYEGMTANGFSEKAVKALWDTILPFAGY
AFNKSHAAGYGLVSYWTAYLKANYPAEYMAGLLTSVGDDKDKAAVYLADCRKLGITVLPP
DVNESLVNFASVGQDIRFGLGAVRNVGANVVGSLIGTRSGKGKFTDFSDYLNKIDISACN
KKVTESLIKAGAFDSLGHPRKGLFLVHTDAVDSVLGTKKAEAMGQFDLFGGSDSGADAVF
TIKVPEDEWEDKHKLALEREMLGLYVSGHPLNGVAHLLAAQVDTAIPAILDGDVSNDAQV
RVGGILAAVNRRVNKNGMPWASAQLEDLTGGIEVMFFPHTYSNYGADIADDAVVLVNAKV
AIRDDRISLIANELVVPDFSNAQADRPLAVSLPTRQCTIDKVTALKQVLARHPGTSQVHL
RLISGDRITTLELDQSLRVTPSPALMGDLKELLGPGCLGS
NT seq
3543 nt
NT seq
+upstream
nt +downstream
nt
atgagcggttcttcttcgcggtcctttgtgcacctgcacaaccacaccgagtactcgatg
ctggatggtgcggcgaagatcacccccatgctggccgaggtggaacggctggacatgcct
gcgatcgggatgaccgaccacggaaacatgttcggcgccagcgagttctacaactcggca
accaaggccggggtgaagccgatcatcggcgtcgaggcgtatgtagctcccggctctcgt
ttcgatacccgtcgcatcacctggggtgatcccagccagaagggcgacgacgtatccggt
agcggctcttacacccacctgacgatggtggccgagaacgcgaccggcctgcgcaacctg
ttcaagctgtcgtcactggcctcgttcgagggtcagctcggtaagtggtcgcgcatggat
gccgaacttgtcgccgagcacgccgagggcatcatcgccaccaccggctgcccctccggt
gaggtgcagacccggctgcggctgggccatgaccgcgaagcgctggaatcggccgccaag
tggcgggagattttcggcgccgacaactacttcctcgagttgatggatcacggactgtcc
atcgaacgccgcgtccgtgagggtctgatcgagataggccgcaagctcgacattccgccg
ctggccaccaacgactgccattacgtcactcgcgacgccgcgcacaaccacgaggcgctg
ctgtgtgttcagaccggcaagacgctctcggaccccaaccggttcaagttcgacggtgac
gggtactacctcaagtccgccgccgagatgcgccaactctgggacgacgacatcccgggc
gcctgcgactccaccctgctgatcgcggagcgagtgcagtcctatgccgacatatggacc
ccgcgtgaccggatgccgatcttcccggtgcccgaggggcacgatccggcgtcgtggctg
catcacgaggtgatggcgggcctgcggcgacgtttcccgtccggtctcggccaggactac
atcgaccgggctgagtacgagatcaaggtgatctgcgacaagggtttcccgtcgtacttc
ctgatcgtggccgacctgatcaactatgcgcggtcggtcgacattcgagtgggaccgggg
cgtggttcggcggccggctcgctggtggcctacgcgatgggcatcaccaacatcgacccg
ataccgcacggtctgctgtttgagcggttcctcaacccggagcgcccgtcagcgcccgat
atcgatatcgacttcgacgaccgccgtcgcggcgagatggtgcgctacgccgccgacaag
tggggccaggatcgagtcgcccaggtcatcaccttcggcaccattaagaccaaggcggcg
ctgaaggattccgcgcgtatccactatggccagcccgggttcgcgatcgccgaccgaatc
accaaagcgttgccgccgccgatcatggccaaggacattccgctgtccggcatcaccgac
ccggcccacgagcggttcaaggaggccgcggaggttcgcggcctcatcgagaccgacccc
gacgtccgcaccatctaccagaccgcgcgcgggctggaaggcctgatccgtaatgcgggc
gtgcacgcgtgtgcggtgatcatgagcagcgaacccctgacggaggccattccgctgtgg
aagcggcctcaagacggggccatcatcaccggctgggactacccgtcgtgtgaggcgatc
ggcctgttgaagatggacttcttgggcctgcgaaacctgacgatcatcggcgacgcgatc
gagaacatcaaggccaaccggggaatcgacctcgacctggaatcgctgccgctcgacgac
aagcccacctacgagctgttgggacgcggtgagacgctgggcgttttccagctcgacggc
gggccgatgcgcgacctgctgcgtcgcatgcaacccaccgagttcaatgacatcgtcgct
gtcctggcgctgtaccggccaggcccgatgggcatgaacgcccacaacgactatgccgac
cggaagaacaatcgccaggcggtcaagccgatccaccccgagctggaggagccgctgcgc
gaaatcctctcggagacctacggtctgatcgtctatcaagagcagatcatgttcatcgcc
caaaaggtcgcctcctacacgatgggtaaggccgacgcgctgcgcaaggcgatgggcaag
aagaagctcgaggtgctcgaggcggaatacaagggcttttacgaaggcatgaccgccaac
ggattctccgaaaaagcggtcaaggcgctgtgggacaccatcctgccgttcgccggatac
gccttcaacaagtcgcacgccgcgggctacggtctggtctcgtattggaccgcctatctg
aaggccaactacccggccgagtacatggcagggttgctgacctcggtcggtgacgacaag
gacaaggccgcggtctacctggccgattgccgcaagctcggcatcaccgtgctaccgccc
gatgtcaacgagtcattggtgaacttcgcctcggtcgggcaggacatccgcttcgggttg
ggtgcggtgcgcaatgtcggggccaacgtcgtcggttcgttgatcggtacccgcagcggc
aaaggcaaattcaccgacttctccgactacctgaacaagatcgacatctcggcctgcaac
aagaaagtcaccgagtcgctgatcaaggcgggggcgttcgactcgctcgggcacccgcgc
aaaggcctcttcctggtgcacaccgacgccgtggactcggtgctgggtaccaagaaggcc
gaggcgatgggacagttcgatctcttcggcggcagcgactcgggtgccgacgcggtgttc
accatcaaggttcccgaggacgagtgggaagacaaacacaaactcgcactggaacgcgag
atgctgggcctgtacgtgtcggggcatccactcaacggggtggcacatctgttggccgcc
caggttgataccgcgatcccggcaatcctggatggtgatgtctccaacgatgcccaggtg
cgggtgggtggcatcctggcggccgtgaaccggcgggtcaacaagaacgggatgccttgg
gcatcagctcaattggaagatctcaccggtggtatcgaggtgatgttcttcccgcacacc
tactccaactatggcgccgatatcgccgacgacgccgtggtgctggtcaacgccaaggtc
gcgattcgcgacgaccgcatcagcttgatcgccaacgagctcgtggtgcccgacttttcc
aatgcccaggcggatcggccgctggccgtgagcctgcccacccggcagtgcaccatcgac
aaggtcaccgcactcaaacaggtgctggctcggcacccgggtacgtctcaggtgcatctg
cggctgatcagtggggatcggatcaccacgctggagctcgaccagtcactacgggtcacg
ccatcgccggcgttgatgggcgatctgaaagagctgctcggtcccggctgcctgggcagc
tga
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integrated database retrieval system
