Mycobacterium liflandii: MULP_04265
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Entry
MULP_04265 CDS
T02444
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
mli
Mycobacterium liflandii
Pathway
mli03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mli00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MULP_04265 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mli03021
]
MULP_04265 (rho)
03019 Messenger RNA biogenesis [BR:
mli03019
]
MULP_04265 (rho)
Transcription machinery [BR:
mli03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
MULP_04265 (rho)
Messenger RNA biogenesis [BR:
mli03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
MULP_04265 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATP-synt_ab
Rho_RNA_bind
Rho_N
Spore_III_AA
AAA_25
NACHT
VWA_2
AAA_22
DUF7440
Motif
Other DBs
NCBI-ProteinID:
AGC63845
UniProt:
L7VBC9
LinkDB
All DBs
Position
complement(4656713..4658578)
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AA seq
621 aa
AA seq
DB search
MTDTDLITAGESTDADKKSDSVTKDSSDLNTAAPTGALATMVLPELRALANQVGVKGTSG
MRKNELIAAIQEFRDRANGTPAAAEPTPDSGEQKSSASTEAPAVNEATKDAPQQEQNASS
GDTVRRERRRSSRDSGTSSRDGADSAGESPDKRGKRAAGGDADNNQKAPEKAQEDAKTDG
GAAESGGDQGAGQQGSGGQQSRGEDDGEGRQGRRGRRFRDRRRRGERSGDGSDAELREDD
VVQPVAGILDVLDNYAFVRTSGYLAGPHDVYVSMNMVRKNGLRRGDAVTGAVRVPREGEQ
PNQRQKFNPLVRLDSVNGGSVEDAKKRPEFGKLTPLYPNQRLRLETTTERLTTRVIDLIM
PIGKGQRALIVSPPKAGKTTILQDIANAITKNNPECHLMVVLVDERPEEVTDMTRSVKGE
VIASTFDRPPSDHTSVAELAIERAKRLVEQGKDVVVLLDSITRLGRAYNNASPASGRILS
GGVDSTALYPPKRFLGAARNIEEGGSLTIIATAMVETGSTGDTVIFEEFKGTGNAELKLD
RKIAERRVFPAVDVNPSGTRKDELLLSPDEFAIVHKLRRVLSGLDSHQAIDLLMSQLRKT
KNNYEFLVQVSKTTPGNMDND
NT seq
1866 nt
NT seq
+upstream
nt +downstream
nt
gtgactgatacggacctcatcacggctggcgaaagcaccgacgctgataagaagtcggat
tccgtgacaaaagacagttccgacctcaatactgctgcgccgaccggcgcgctggccacc
atggtgctgccggaactgcgcgcgctggccaaccaagttggtgtcaaggggacgtcgggc
atgcgtaagaacgagctgatcgccgcgatccaagaatttcgggaccgcgccaacggcacg
cccgcggccgccgagccgaccccagattccggcgaacagaagtcctcggcgagtaccgag
gccccagcggtcaacgaggccaccaaagacgctcctcaacaggagcaaaacgcctcatcc
ggcgacacggtgcgccgcgagcggcgcagatcctcgcgtgactcgggaacgtcgtcacgt
gacggcgccgactcggctggcgaaagcccagataaacgcgggaagcgggccgccggcggc
gatgccgacaacaatcagaaggcgccggaaaaggctcaagaagacgccaagactgacggg
ggagcagcggagtcgggcggtgaccaaggcgccggccagcagggctcgggtggccagcaa
tcgcgcggcgaagacgatggcgaagggcggcagggccggcgaggacgccgattccgcgac
cgccggcgtcgtggggagcgctcgggtgacggttccgacgccgagttgcgtgaggatgac
gtcgtccagccggtcgccggcattcttgacgtgctcgacaactacgcctttgtccgtacc
tccggctaccttgccggcccgcacgacgtctacgtgtcgatgaacatggtgcgcaagaac
ggcctgcgccgcggcgacgcggtcaccggcgccgttcgggttccgcgtgaaggcgagcag
cctaaccaacgacaaaaattcaacccgctggtgcgtttggacagcgtcaatgggggatcg
gtcgaggacgccaagaagcggcccgaattcggcaaactgacgccgctctatcccaaccag
cgtcttcgcttggaaaccaccacagagcggctgaccacgcgggtcatcgatctgatcatg
ccgattggcaagggccagcgcgcgctgatcgtctcgccccccaaggccggtaagacgacg
atcctgcaggacatcgccaacgccattaccaagaacaatccggaatgccacctcatggtc
gtgctcgtcgacgagcggcccgaggaggtcaccgacatgacgcgttcggtcaagggtgag
gtcatcgcctcaacgttcgaccgtccgccatccgaccacacatcggtcgcggagctggcc
atcgagcgagccaagcgcctcgtggagcagggcaaagacgtcgtggtgctgctggactcc
atcacccggttgggacgtgcctacaacaacgcgtcgccggcatcgggccggattctctcc
ggcggtgtcgactccaccgcgctgtacccgcccaagcgattcctgggtgcggcacgcaac
atcgaagagggcggctcgctgaccatcatcgcgaccgcgatggtcgagaccggctccacc
ggtgacaccgtcatcttcgaagagttcaagggcaccggtaacgccgagctcaagctggac
cgcaagatcgccgagcggcgcgttttccccgcggtcgacgtgaacccgtcgggtacccgt
aaagatgagctgctgctctcacctgatgagttcgccatcgtccacaagctgcgtcgcgtg
ctgtccggcctggattcccaccaggccatcgacctgctgatgtcgcagctgcgtaagacc
aagaacaactacgagttcctcgtgcaggtctccaagaccacaccagggaatatggacaac
gactag
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