Mariniflexile litorale: QLS71_011480
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Entry
QLS71_011480 CDS
T10312
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
mlil Mariniflexile litorale
Pathway
mlil03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mlil00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
QLS71_011480
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mlil03019
]
QLS71_011480
03009 Ribosome biogenesis [BR:
mlil03009
]
QLS71_011480
Enzymes [BR:
mlil01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
QLS71_011480
Messenger RNA biogenesis [BR:
mlil03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
QLS71_011480
Ribosome biogenesis [BR:
mlil03009
]
Prokaryotic type
rRNA helicases
QLS71_011480
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
FliG_M
Motif
Other DBs
NCBI-ProteinID:
XBL12951
UniProt:
A0AAU7EDP0
LinkDB
All DBs
Position
complement(2771638..2773518)
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AA seq
626 aa
AA seq
DB search
MNTFQDLGLNEDLLHAITDLGFETPSDVQIKAIPILLESETDLVALAQTGTGKTAAFGFP
MLQKIDIDSRTTQGLILSPTRELCLQITNEMKQYGKYCKGLNVVAIYGGSSITDQARDVK
KGAQIIVATPGRMKDMISRRLVDISKIQYAVLDEADEMLNMGFKEDITDILSHSPEGKNT
WLFSATMPREVAMIAKKFMKNPQEITVGNKNESTSQVTHEYYLVNSRDRYDALKRLADAN
PDIFSVVFCRTKNDTQKVAERLIEDGYSAGALHGDLSQNQRDLVMKSFRNKQIQMLVATD
VAARGIDVDDITHVINYQLPDEIETYTHRSGRTGRAGKTGVSMVIVSKSEVRKIKSIERI
INKAFEKKDIPNGMAICEVQLMSLANKIHHTEVNHEIDKYLTSINELFEETSKEELIKKF
FSVEFSRFFNYYQKSKNLNVSEGDIRDRDSGRDGGRDFGGSSDSTRYFINVGSKDGFDWM
QLKDFLKEVLELGRDDVFKVEVKESFSFFNTENELKDKILAFFTDYKHNGRFVNVEVSEN
RGGGGRRNDRRSGGRRDDRKGSERRSSSRGDSGNRGERRGGDESRPRRSGGDFKSAGSAP
NRSARRSGSDSKPSDSGVSRPRRSRR
NT seq
1881 nt
NT seq
+upstream
nt +downstream
nt
atgaacacattccaagatttaggtcttaatgaagacctgttacacgctattaccgattta
ggttttgaaaccccaagtgatgtacaaattaaagcaatcccaattttattagaatctgaa
accgatttagtggctttagcccaaacaggaacaggaaaaacggcagcatttggttttcct
atgcttcaaaaaattgatattgatagcagaaccacacaaggtcttattttatcaccaaca
cgtgaactttgcttgcaaattaccaatgaaatgaaacaatacggtaagtattgtaaagga
cttaatgttgtggcaatttatggtggttctagtataacagaccaagctagagatgtaaaa
aaaggtgcgcaaattattgtggctacacctggacgtatgaaagatatgattagcagacgt
ttggttgatatttctaaaattcaatatgctgttttagacgaggctgatgagatgctaaac
atgggttttaaggaagatatcactgatattctttcgcattctcctgaaggaaaaaacacc
tggttattttctgcaaccatgcctagagaagttgctatgattgctaaaaaattcatgaaa
aatccacaagaaattactgtgggtaataaaaatgaaagtaccagtcaagtaactcatgaa
tattatttagtaaattcaagagaccgttatgatgctttaaaacgtttggcagatgcgaat
cctgatattttttcggtggttttctgtagaacaaaaaacgatactcaaaaagttgctgaa
cgattaattgaagatggttatagtgcaggtgcattacacggcgatttaagccaaaaccaa
cgtgacttagtaatgaaatcgtttagaaataagcaaattcaaatgcttgtagcgactgat
gtggctgctcgtggtattgatgtagatgatattactcacgtaataaactaccaacttcct
gatgaaattgaaacgtatacgcaccgttctggtcgtacaggtcgtgccggaaaaacagga
gtttccatggtaatcgtttctaaaagtgaagtacgtaaaataaaaagtattgaacgcatt
attaataaagcttttgagaaaaaagacattccaaatggcatggcaatatgcgaagtgcaa
cttatgtcgcttgctaataaaattcaccatacagaagttaaccacgaaatagacaaatat
ctaaccagtattaacgaattgtttgaagaaacatcaaaagaagaattaattaaaaaattc
ttttcggttgaattttcacgtttcttcaactattaccaaaaatctaaaaacctaaatgtt
tcagagggtgatatccgagatagagatagtggacgtgatggcggtcgcgattttggagga
agttcagattccacccgttactttatcaacgttggtagtaaagatggtttcgattggatg
cagttaaaagatttcttaaaagaagttttagaacttggtagagacgatgtgtttaaagtg
gaagtaaaagagagcttctctttctttaatactgaaaatgaattaaaagataaaatatta
gctttctttacagattataaacacaacggacgttttgtaaatgttgaagtttctgaaaac
cgcggtggtggtggaagacgcaacgacagacgtagtggcggaagacgtgatgatagaaaa
ggtagtgaaagacgctctagttctagaggggattctggaaacagaggtgaaagacgtggt
ggcgatgaatcaagaccaagacgttctggtggcgattttaaatcggccggttcagcacca
aacagatcggcaagacgttcagggagcgactctaaaccaagtgattctggagtttcaaga
ccgagacgctctagacgttaa
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