Mariniflexile litorale: QLS71_018740
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Entry
QLS71_018740 CDS
T10312
Name
(GenBank) RecQ family ATP-dependent DNA helicase
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
mlil Mariniflexile litorale
Pathway
mlil03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mlil00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
QLS71_018740
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mlil03019
]
QLS71_018740
03400 DNA repair and recombination proteins [BR:
mlil03400
]
QLS71_018740
Enzymes [BR:
mlil01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
QLS71_018740
Messenger RNA biogenesis [BR:
mlil03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
QLS71_018740
DNA repair and recombination proteins [BR:
mlil03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
QLS71_018740
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
RecQ_Zn_bind
Cas3-like_C_2
SNF2-rel_dom
DUF2620
Motif
Other DBs
NCBI-ProteinID:
XBL14333
UniProt:
A0AAU7EGA4
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All DBs
Position
4411658..4413562
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AA seq
634 aa
AA seq
DB search
MEQPINILERYWNFTEFRPEQEAIINAVIKGEDTFVLLPTGGGKSLCFQIPALAKEGICV
VISPLIALMKDQVQQLNDKGIKAMALTSGITYSQLDTLLDNCIYGNYKFLYLSPERLQQE
LVQERIKQMHVNLIAVDEAHCISQWGSDFRPAYKNIVLLRQLQPTINVVALTASATPEVV
DDIIKELDFIQPKVFKQSFYRPNLGYMVYHENDKYYRIETILKKYKASSIIYVRNRKSTL
EVSSFLNSKSILATYYHGGLTNVEKDTNMTLWLQNQKQVMVATNAFGMGIDKPDVKTVIH
LNLPESIESYFQEAGRVGRNGDKAFAVILKNNSDEVSVKNQFLSVLPTVDFVKQVYRKLC
SYFQISYGEGEYVTSDFDFNSFCKTYSFNSVLSYNALLLLDRNSVITLSKQFKNKVSAQF
IISSGSLFNYLESHSNFNLIVKSILRMYGGIFDQNTKIDLVKIAEKASTNENEVTKTLLQ
LEKDEIITLNLAKTDAQVTFIEPREDDKTINRIASIIEQQNELKQFQVKEMLKYIENESV
CKSMQLLAYFGEKDAKPCGICSVCTNTKKTIKPPDLTIIRKQVIELLETGDKSSRNMVAA
LNCSETDLKTVLKLLLEHHIISITPRNTYKLSHL
NT seq
1905 nt
NT seq
+upstream
nt +downstream
nt
atggaacaacccataaacatattagaacgctattggaattttaccgaattccgccccgag
caagaagccatcatcaatgcggttattaaaggggaagatacgtttgtactgcttcccacc
ggtggtggaaaatcgctatgttttcaaatacctgctttagccaaagaaggtatttgtgtg
gttatttctccattgatagccttaatgaaagaccaagtacagcagcttaatgataaaggt
atcaaagccatggcacttacaagtggcatcacgtacagccaattagatacgcttttagat
aattgtatttatggtaattataagtttttatatctgtcgcccgaacgtttacaacaagaa
cttgtgcaagaacgcatcaagcaaatgcatgtgaatttaattgcggtagatgaagcacat
tgtatttcacaatggggtagtgattttagacctgcatataaaaatatcgttttactgcgc
caattacaacccaccattaatgtcgtggccttaacagcatccgcaactcctgaagtggta
gacgatattattaaagaacttgattttattcaacccaaagtatttaaacagtcgttttac
agacctaatttagggtatatggtatatcatgaaaatgataaatactatcgtattgaaacc
attttaaaaaaatataaagcatcttctattatttacgttcgaaacagaaaatccacttta
gaagttagttcctttttaaattctaaaagcattttagcaacttattatcatggtggttta
accaatgtagaaaaagacacaaacatgacgctttggctacaaaaccaaaaacaagtgatg
gtggccacaaacgcatttggaatgggtattgacaagcccgatgttaaaacggttatccat
ctaaatttacctgaaagtattgaaagttattttcaagaagcgggtcgtgtaggacgtaat
ggagacaaagcttttgctgttattttaaaaaataatagtgacgaagtctctgttaaaaat
cagtttttgagtgttttaccaactgtagattttgtaaagcaagtctacagaaaactatgt
agttattttcaaatatcatacggtgaaggtgaatatgttacatctgattttgattttaat
tctttttgtaaaacctacagctttaattcagttttatcatataatgccttattattatta
gatagaaatagtgtaattacgctttcaaaacaattcaaaaataaagtatcggcgcaattt
ataatatcgagtgggtcgctttttaattatttagaaagtcattcaaattttaacctaata
gttaaatcaatcttaagaatgtatggtggtattttcgaccagaatacaaaaatagatctc
gttaaaattgcagaaaaagcatctacaaacgaaaatgaagtaacaaaaacactgcttcaa
ttggaaaaagacgaaatcatcaccttaaatttagcaaaaacggatgcacaagttactttt
atcgagccacgtgaagatgataaaaccatcaaccgcattgcatctatcatagaacaacaa
aacgaattaaagcagtttcaagtaaaagagatgcttaagtatattgaaaacgaatcggta
tgtaaaagcatgcaactactcgcctattttggcgagaaagatgctaaaccctgcggcatt
tgttccgtatgtacaaatactaaaaaaacaataaaaccaccagacctaactatcattaga
aaacaggtgatagagttgttggaaacaggcgacaaatcttcaagaaacatggttgcagcc
ttaaactgctcggaaaccgatttaaaaacagttttaaaattacttttagaacaccatatt
atttctataacaccaagaaacacatataaattaagtcatttgtaa
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