Maribacter litopenaei: NYZ99_08215
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Entry
NYZ99_08215 CDS
T08914
Name
(GenBank) UvrD-helicase domain-containing protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
mlio
Maribacter litopenaei
Pathway
mlio03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mlio00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
NYZ99_08215
03430 Mismatch repair
NYZ99_08215
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mlio03400
]
NYZ99_08215
Enzymes [BR:
mlio01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
NYZ99_08215
DNA repair and recombination proteins [BR:
mlio03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NYZ99_08215
MMR (mismatch excision repair)
Other MMR factors
NYZ99_08215
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
Viral_helicase1
AAA_30
ResIII
ERF
Motif
Other DBs
NCBI-ProteinID:
UWX56215
UniProt:
A0ABY5YAX8
LinkDB
All DBs
Position
1558373..1560697
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AA seq
774 aa
AA seq
DB search
MSSFIDELNDAQKAPVLHKDGPLMVIAGAGSGKTRVLTYRIAYLMEQGVDAFNILALTFT
NKAAREMKKRISDIVGVSETKNLWMGTFHSVFAKLLRYDGDKLGYPSNFTIYDTQDSQRL
IASIIKEMGLDKDIYKYKQVQNRISSFKNSLITVKAYFNNPELMEADAMAKRPRIGDIYQ
NYVDRCFKAGAMDFDDLLLRTNELLTRFPDVLLKYQDRFRYILVDEYQDTNHSQYLIVRA
LADRFQNICVVGDDAQSIYSFRGANISNILNFQRDYDNVALYRLEQNYRSTKNIVNAANS
IIAKNKNQLEKNVWTANDDGAAIKIHRSITDAEEGRFVANSIWEHKMQNQMGNGEFAVLY
RTNSQSRAIEDALRKRDIPYRIYGGLSFYQRKEIKDVLSYLRLIINPKDEEALKRVINFP
ARGIGQTTIDKLVVAANHYGRSIFEVMENISKIDLKINAGTKRKLEDFVTMVKSFQIMNE
GTDAFSPAEHVAKKTGLLLEFKKDGTPEGIARMENIEELLNGIKDFVEGQKELADATGGL
NEFLEDVALATDLDNDTGDDDRVALMTIHLAKGLEFPYVYIVGMEEDLFPLGMSMNTRSE
LEEERRLFYVALTRAEKQAYLTYTQNRYRWGKLIDAEPSRFLEEIDEQYVENLTPLDGGY
RYKSMIDADIFGEVDKSKLRRTKPVNGTPPSIGRPNTNQLQKLRKIKPELSQPVGNTNTI
DPSLAEGSFVNHSRFGRGKVLKIEGVGNDRKAEIRFDQGDVKKLLLRFAKLEVL
NT seq
2325 nt
NT seq
+upstream
nt +downstream
nt
ttgagttcttttatagatgaattgaatgatgcccaaaaagcacctgttttgcataaagat
gggcctttaatggtcattgcaggagcaggttcgggaaagacaagggtacttacctatcgt
atcgcttatttgatggagcagggtgtggatgcctttaatattttggcacttacttttacc
aacaaggctgctcgtgaaatgaaaaagcgaatcagtgatatcgtaggggtttccgagaca
aaaaacctttggatgggaacctttcactccgtatttgccaaactgttgcggtatgatggg
gacaagcttggttaccctagtaattttaccatatatgatacgcaggattcacaacgttta
atcgcctctatcattaaggaaatgggtttggacaaggacatctacaagtacaaacaagta
caaaaccgaatttcttcctttaaaaatagcctcatcacagtcaaagcatattttaacaat
cctgagcttatggaggcagatgccatggccaaaagaccaaggataggagatatttaccaa
aattatgtggatcgttgttttaaggctggggctatggattttgatgatttacttctgagg
accaatgagttgttgacgcgctttcccgatgtccttcttaagtatcaagatcgttttcga
tacatattagtagacgagtatcaggatactaaccactcccaatacttaattgttagggcc
cttgcagaccgctttcaaaatatttgtgttgtgggtgacgatgcccaaagtatctattcc
tttaggggtgcaaacatcagcaatattttaaattttcagagagattatgataacgtagcc
ttgtatcgattagaacagaattatcgatcgacaaagaatatcgtaaacgcagctaattct
atcattgccaagaataaaaaccagttggaaaagaatgtttggacggccaatgatgacggg
gcggcaatcaaaatccaccgaagtattaccgatgcagaggaaggccggtttgtggccaat
tccatttgggagcataaaatgcaaaatcaaatgggaaatggggaattcgctgttttgtat
cgaactaactcccagtctagggcaattgaagacgctttgcgtaagcgcgatattccgtac
agaatttatggcggactttctttttatcaacggaaggaaatcaaggatgtattgtcctat
ttaagattgattatcaatccaaaggacgaggaggcattaaaaagggtcatcaactttccg
gcgcgaggcataggtcaaacaaccattgataaattggtggtggccgccaatcattatggt
cgttccatatttgaagtcatggaaaatatttcaaaaattgacctcaagattaatgctggt
accaagagaaagctggaggattttgtaacgatggtcaaaagtttccaaatcatgaacgag
ggcaccgatgcctttagtccggcggaacatgtggccaagaaaaccggattattactggag
tttaaaaaggacggcacccctgaaggtatcgcccgtatggaaaatattgaggagttgcta
aatggtatcaaggattttgttgagggccaaaaggaactagcggatgcaacgggtggcttg
aacgaattcttagaggatgtggccctagcaaccgatttggataacgatactggagatgat
gatcgggttgctctaatgaccattcacttggccaagggactggaattcccatatgtctat
attgtaggtatggaagaagacctgttccctctcggaatgagtatgaacactagaagcgag
ttagaggaggagcgacgacttttttatgtggcattaacacgcgcagaaaagcaggcttat
ttgacctatacccaaaaccgatatcgctggggaaaattaatagatgcggaacccagtaga
tttttagaggaaatcgatgagcagtacgtggagaatttaactcctttggatggaggatat
cgctacaagtccatgattgatgccgacatttttggtgaagtggataagagtaaattgcgc
cggaccaaacccgtaaatggaacacctccaagcatcggcaggccgaatacaaatcaacta
caaaagctgaggaaaatcaaaccggaactttctcaacccgtaggaaacacaaacacaatt
gaccctagtttggccgaaggatcttttgtaaaccattcaaggtttggtaggggcaaagta
cttaaaatagagggtgtagggaatgatcgcaaggcagagatcaggtttgatcagggggat
gtgaaaaaattgttgcttaggtttgcaaaattggaggtgctgtaa
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