Maribacter litopenaei: NYZ99_16130
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Entry
NYZ99_16130 CDS
T08914
Name
(GenBank) DNA topoisomerase IB
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
mlio
Maribacter litopenaei
Brite
KEGG Orthology (KO) [BR:
mlio00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mlio03032
]
NYZ99_16130
03400 DNA repair and recombination proteins [BR:
mlio03400
]
NYZ99_16130
Enzymes [BR:
mlio01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
NYZ99_16130
DNA replication proteins [BR:
mlio03032
]
Prokaryotic type
DNA Topoisomerases
NYZ99_16130
DNA repair and recombination proteins [BR:
mlio03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
NYZ99_16130
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Motif
Other DBs
NCBI-ProteinID:
UWX54433
LinkDB
All DBs
Position
2979493..2980581
Genome browser
AA seq
362 aa
AA seq
DB search
MTTNVSYDIDFIDKLMTQPSEAASHLDLKYVQRENLTILRIRRGKKFAYILHKKPIRKKS
ELERIAQLVIPPAWEDVKISSISNAHLQAIGYDLKNRLQYKYHPTWTKVRNRTKFFKMRH
FGETLPQIRENIERDLLLEGWPKNKVMALILKLMEETHIRIGNQQYAKRNKTYGLSTLRR
RHITFFKEKLRFEFTGKKGKKHKITLRNKKLRNLVGKCEEIPGWELFQFFEEDGTKTNVD
SGMVNEYIHEISGHHFTAKDFRTWAGTVIFYEALQDMPRANSDKEIKKNILSAFDKTAKE
LGNTRNVCRTFYVHPLVVKKYEQGSLLLDLGDSNKNNTTTDLTTTEKEVLRIIKEYKPLK
NL
NT seq
1089 nt
NT seq
+upstream
nt +downstream
nt
atgaccaccaatgtttcttacgatatagatttcatagataaacttatgactcaacccagc
gaggcagcctctcacttggacttaaaatatgtacaaagggaaaacctaaccatcctaaga
attagaagaggaaaaaagtttgcctacatacttcataaaaaaccaattcgaaaaaaatcc
gagttggagcgaattgcccaactggtcattcctcctgcatgggaggatgtaaaaatttct
tccatctccaatgcccatctccaggccataggatatgaccttaaaaatagactacagtat
aaatatcatccaacctggacgaaagtaaggaaccgcaccaaattttttaaaatgcggcat
tttggggagacgcttccacagattagggaaaatatagaaagagacttactcttagaaggt
tggcctaaaaacaaagtgatggccctaattcttaaacttatggaagagacccatattaga
attggtaaccagcaatatgccaagaggaataagacctacggcctttctacccttaggaga
agacatataacgtttttcaaagagaaactccggtttgagtttacaggaaaaaaggggaaa
aagcacaaaataaccttaagaaacaaaaagctacgaaatcttgtaggcaagtgcgaggaa
atacctggttgggagctctttcaattctttgaggaagatggaacaaaaactaacgtggat
agtggtatggtaaacgagtatatccatgagataagcgggcaccacttcactgcaaaggac
tttagaacatgggcgggaactgttatattctatgaagccttacaggatatgcctagagca
aattctgataaagaaatcaaaaagaacattctatccgcatttgataagacggcaaaggaa
ctaggcaatacaagaaatgtttgccgcacattttatgtgcacccattggtggtgaaaaaa
tatgagcaaggcagtctgcttttagatttgggtgattcgaataaaaacaataccaccacg
gatctaacgaccaccgaaaaagaggtcttgagaattattaaggaatataaaccattaaaa
aacctataa
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