Microbacterium maritypicum: NMQ05_05770
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Entry
NMQ05_05770 CDS
T08516
Name
(GenBank) DEAD/DEAH box helicase
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
mliq
Microbacterium maritypicum
Pathway
mliq03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mliq00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NMQ05_05770
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mliq03019
]
NMQ05_05770
03400 DNA repair and recombination proteins [BR:
mliq03400
]
NMQ05_05770
Enzymes [BR:
mliq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
NMQ05_05770
Messenger RNA biogenesis [BR:
mliq03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
NMQ05_05770
DNA repair and recombination proteins [BR:
mliq03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
NMQ05_05770
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
RecQ_Zn_bind
Pribosyltran
KORA
DUF5667
Motif
Other DBs
NCBI-ProteinID:
UTT54089
LinkDB
All DBs
Position
1135181..1137316
Genome browser
AA seq
711 aa
AA seq
DB search
MTSAASTDTREAARAALRELVGRSDADFHDGQYEAIEALVEGRRRALVVQRTGWGKSAVY
FVATLLLRRQGAGPTVLVSPLLALMRDQIAAAERAGVRAVAINSTNAHEWTDVLGQLDRD
EVDVLLVSPERLNNPAFREQQLPALVRRIGMLVVDEAHCISDWGHDFRPDYRRLRDLIAQ
MPADVPVLATTATANSRVVADVAEQLGSLQAGGDLRGDAGAEPVLTIRGPLARTSLRLGV
LRLRDSASRLAWLLSHLDDLPGSGIIYTLTVAAAVDTARLLRDHGHDVRAYTGQTDTEER
AESEGMLKRNEVKALVATSALGMGFDKPDLGFVLHLGAPSSPVAYYQQVGRAGRASESAD
VLLLPGIEDRDIWHYFATASMPDRERAERVIGALGDAPISTPALEAMVDIRRTPLELLLK
VLDVDGAVRRVQGGWVATGEPWTYDAERYERIAAERLAEQQHMIEYEQTDGCRMEFLQRS
LDDDTAAPCGRCDNCAGGWFPREIGESASTQAAESLDRVGIPIEPRRAWPTGADRLEVPV
KGRIPADEQAGEGRALARLTDLGWGGALREIFAAGAPDTAVTPQLLQACIRVLAGWGWEQ
RPVAVVAMPSRSHPLLVDSLARGLADVGRLPYLGALDPVAGGPTGGPGGNSVFRLAGLWD
RFSAQHLEVPPGPVLLVDDLVDSRWTMTVAARVLRQAGATQVLPFALALRG
NT seq
2136 nt
NT seq
+upstream
nt +downstream
nt
atgacctccgcagcctccaccgacactcgcgaggccgcccgcgcggcactgcgcgagctc
gtcggccgctcagacgccgacttccacgacggccagtacgaggcgatcgaggccctcgtc
gaggggcgccgccgcgcgctggtggtgcagcgcaccggctggggcaagtcggcggtctat
ttcgtcgcgacgctgctgctgcggcgtcagggtgcggggcccaccgtgctcgtgtcgccg
ctgctggcgctcatgcgcgaccagatcgcggccgccgagcgtgcaggggtgcgtgcggtc
gcgatcaactccaccaatgcgcacgaatggaccgacgtgctcgggcagctcgaccgcgac
gaggtcgacgtcctgctggtctcgccggagaggctcaacaatccggccttccgcgagcag
cagctgccggcgctcgtgcgccgcatcgggatgctcgtcgtcgacgaggcgcactgcatc
agcgactggggccacgatttccgccccgactaccggcggctgcgcgacctgatcgcgcag
atgcccgccgatgtaccggtgctcgcgaccaccgcgacggcgaacagccgggtcgtggcg
gatgtggcggagcagctcggcagccttcaggcgggtggcgatctgcgcggcgatgccgga
gccgagccggtgctcacgatccgcggaccgctcgcgcgcacctcgctgcgcctcggcgtg
ctgcgcctgcgcgattcggcgagccgcctcgcgtggctgctgagccacctcgacgacctt
cccggttccggcatcatctacaccctgaccgtcgcggctgccgtcgacaccgcccgcctg
ctgcgcgatcacgggcacgacgtgcgggcctacaccgggcagaccgacaccgaggagcgc
gccgagtccgagggcatgctcaagcgcaacgaggtcaaggccctggtcgccacgagcgcg
ctgggcatgggcttcgacaaacccgatctgggattcgtgctgcacctgggagcgccgtcg
tctcccgtggcgtactaccagcaggtgggtcgtgccggccgtgccagcgagagcgccgac
gtgctgctgctgcccggcatcgaagatcgcgacatctggcactacttcgcgaccgcctcg
atgccggatcgggaacgcgcggagcgggtgatcggcgcgctcggcgatgctccgatctcg
acgccggcgctcgaggcgatggtcgacatccgccgcacgccgctggagctgctgctgaag
gtgctcgacgtcgacggtgcggtccggcgcgtgcaggggggatgggtcgcgaccggtgag
ccgtggacctacgacgccgaacgctacgagcgcatcgccgccgagcggctcgccgagcag
cagcacatgatcgagtacgagcagaccgacggatgccgcatggagttcctgcagcggtcg
ctcgacgacgacacggcggcgccgtgcgggaggtgcgacaactgtgcgggcgggtggttc
ccgcgcgagatcggcgaatccgcgagtacgcaggcggcggagtcgctcgaccgcgtcggc
atcccgatcgagccgcggcgcgcatggccgaccggagccgatcggctcgaggtgccggtc
aaggggcgcatccccgccgacgagcaggcgggggaggggcgggcgctcgcgcgtctcacc
gacctgggctggggaggggcgctgcgggagatcttcgccgccggtgcgcccgacaccgcg
gtgacgccccagctgctccaggcctgcatacgcgtcctcgccggatgggggtgggagcag
cgacccgtcgccgtcgtcgccatgccgtcgcgttcgcatccgctgctggtcgactcgctc
gcccgagggctcgccgacgtcggccgcctgccgtacctcggcgcgctcgaccctgtcgcg
ggtgggcccaccggagggccgggcgggaacagcgtcttccgtctcgccgggctctgggac
cgtttcagcgctcagcacctcgaggtgccgccggggcctgtgctgctcgtcgacgatctg
gtcgacagccggtggacgatgacggtcgctgcccgcgtgctccgtcaggccggggcgacc
caggtgctgccgttcgcgctggcgctgcgcgggtga
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