Massilia litorea: LPB04_00275
Help
Entry
LPB04_00275 CDS
T09729
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
mlir
Massilia litorea
Brite
KEGG Orthology (KO) [BR:
mlir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mlir03016
]
LPB04_00275 (truB)
Enzymes [BR:
mlir01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
LPB04_00275 (truB)
Transfer RNA biogenesis [BR:
mlir03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
LPB04_00275 (truB)
Prokaryotic type
LPB04_00275 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Motif
Other DBs
NCBI-ProteinID:
QOL49813
UniProt:
A0A7L9U421
LinkDB
All DBs
Position
complement(51475..52395)
Genome browser
AA seq
306 aa
AA seq
DB search
MNARPQKKPRDLVDGVLLLDKPVGLSSNDALIKAKRVMNAKKAGHTGTLDPFATGLLPLC
FGEATKFSQDLLEADKTYDATVHLGIMTNTGDTEGEPIETLPVDVTIAQIEAALARFRGP
ILQVPPMYSALKRDGKAYYEYAREGITLEREARPVTIHGLELIGYEAPMLKIRVTCSKGT
YVRVLGEDIGAALGCGAHLNALRRIQVGALTAEAMITLEDLQAHSDPLSLLAPVDALLSS
FPSVELTPELAKRFLNGQRLALGKEAVVVPTELGRVRVYAEGKLLGTANLQEYAILAPER
LIAAQQ
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
gtgaacgcccgcccgcaaaaaaagccgcgtgacctcgtcgacggcgtcctgctgctggat
aagccggtcggcctgtcctcgaacgacgccctgatcaaggccaaacgcgtgatgaacgcg
aaaaaggccggccacaccggcaccctcgaccccttcgcgaccggcttgctgccgctgtgc
ttcggcgaagccaccaagttctcgcaggacttgctggaagcggacaagacctatgacgcc
acggtccacctgggcatcatgacgaataccggcgacaccgagggcgagcccatcgagacg
cttcccgttgacgtgacgatcgcgcagatcgaggcggcgctggcgcgtttccgcggcccg
atcctgcaggtgccgccgatgtactcggccttgaaacgcgacggcaaggcctattacgaa
tacgcgcgcgaaggcattacgctggaacgcgaagcgcggccggtgacgatccacggcctg
gaactgatcggctacgaagcgccgatgctgaagatccgcgtcacctgcagcaaggggacc
tatgtgcgcgtgctcggcgaagacatcggtgcggccctgggttgcggcgcgcacctgaat
gcgctgcgcaggatccaggtgggcgcgctgacggcggaggcgatgatcacgctggaagac
ctgcaggcgcacagtgacccgctgtcgctgctggcgccggtcgatgcgctgctgtcgagt
tttccgtcggtcgagctgacgccggaactggcgaagcgtttcctgaacgggcagcggctg
gcgctgggcaaggaagcggtcgtcgtgccgacggaacttggccgcgtgcgggtctacgcc
gagggcaagctgctgggtaccgcgaacctgcaggagtatgcgatcctggcgccggaacgc
ctgatcgcggcgcagcaatag
DBGET
integrated database retrieval system
