Massilia litorea: LPB04_00300
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Entry
LPB04_00300 CDS
T09729
Name
(GenBank) rRNA pseudouridine synthase
KO
K06178
23S rRNA pseudouridine2605 synthase [EC:
5.4.99.22
]
Organism
mlir
Massilia litorea
Brite
KEGG Orthology (KO) [BR:
mlir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
mlir03009
]
LPB04_00300
Enzymes [BR:
mlir01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.22 23S rRNA pseudouridine2605 synthase
LPB04_00300
Ribosome biogenesis [BR:
mlir03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
LPB04_00300
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Motif
Other DBs
NCBI-ProteinID:
QOL49818
UniProt:
A0A7L9U482
LinkDB
All DBs
Position
complement(58314..60284)
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AA seq
656 aa
AA seq
DB search
MNPTDTDITPAEPGKDEAAKPKRRTKAAAPAAAAAPAADAAPAAEKPKRRTKAAIAAEAA
APVSAQAPAPAAAPAAAPAADPAPARVSVRKPRAAKAKPAEAPAPAMETWPQPAAASAPA
ADNMAAADAPRQEQGKGDGQRKPRGPRQMREQRASREARQPVAAAAAAPEAPAADAPQAQ
GEQGAAAEQPRREQQRQAKGKGKNGKGGGAQAGQRNAQQGQQGQQNPRGQGGKPNGKGKP
GAKPNDADAVFSFVTSDAFDANEGGRGQPAKQVRRDLTADDDAPKLHKVLAEAGLGSRRD
MEDLIVAGRVSVNGEPAHIGQRILPTDAVRINGKLIQRRVTSSKPPRVLVYHKPAGEIVS
HDDPEGRPSVFDRLPTMKTGKWLAVGRLDFNTEGLLLFTTSGDLANRLMHPRYNIDREYA
VRTLGVLEEGMRQKLLAGVELDDGLANFTKIADGGGEGINKWYRVVIGEGRNREVRRMFE
AVGLTVSRLIRTRYGAMTLPSGLKRGRWEELEENDVRSFMSAFGIEKKGGAGGDGKGKGK
GGQPADPRRSDGNRIDRADANRNVDPFGPPVARVGVPPRGGQAPVGRPAGGKGRGGNAGG
FGGNASGRPNSGGSSRPKQPDPLQTTFGFAGTGGGRRGGQGPRGSEHGLPRRGRRG
NT seq
1971 nt
NT seq
+upstream
nt +downstream
nt
atgaatccaactgacaccgacatcacgcctgccgaaccgggcaaggacgaagcggccaag
ccgaagcgccgcaccaaagctgctgctccagctgccgcagccgcgcctgccgccgacgct
gcgcctgcggccgagaagccgaagcgccgcaccaaggcggctattgcggccgaggccgca
gcgcccgtgagcgcgcaagcgcctgcgccggccgccgcgccggcggctgcaccggctgcc
gatcctgcgccggcgcgcgtctccgtacgcaagccacgtgccgccaaggccaagccggcc
gaagcgccggccccggcgatggaaacctggccgcagccggccgccgcgtcggcccctgcg
gcggacaacatggctgctgccgacgcgccgcgccaggaacaagggaaaggcgacggccag
cgcaagccgcgcggtccgcgccagatgcgcgaacagcgcgccagccgcgaagcacgccag
ccggtcgccgcagcggccgccgcgcctgaagcaccggcagccgacgcgccgcaagcgcag
ggcgagcagggcgccgccgccgagcaaccgcgccgcgagcagcagcgccaggccaagggc
aaaggcaagaacggtaaaggcggtggtgcacaggccggccagcgcaatgcgcagcaggga
cagcaaggccagcagaatccgcgcggccagggcggcaagccgaacggcaagggcaagccg
ggcgccaagccgaacgacgccgacgccgtcttctcgtttgtcacctcggacgccttcgac
gccaacgaaggcggccgtggccagcctgcgaagcaggtgcgccgcgacctgaccgccgac
gacgatgcgccgaagctgcacaaggtgctggccgaagccggtctcggttcgcgccgcgac
atggaagacctgatcgtcgccggccgcgtgtcggtgaacggcgagccggcccacatcggc
cagcgcatcctgccgaccgacgccgtgcgcatcaacggcaagctgatccagcgccgcgtc
accagcagcaagccgccgcgcgtgctggtgtaccacaagccggccggggagattgtcagc
catgacgatccggaaggccgtccatcggtgttcgatcgcctgccgaccatgaagaccggc
aagtggctggccgtgggccgcctcgacttcaacaccgaaggcctgctgctgttcacgacc
tctggcgacctggcgaaccgcctgatgcacccgcgttacaacatcgaccgcgaatacgcc
gtgcggacgctgggcgtgctggaagagggcatgcgccagaagctgctggccggcgtcgaa
ctcgacgacggtctggcgaacttcaccaagatcgccgacggcggcggcgaaggcatcaac
aagtggtaccgcgtggtcatcggcgaaggccgcaaccgcgaagtgcgccgcatgttcgaa
gcggtcggcctgactgtctcgcgcctgatccgtacccgctacggcgcgatgacgctgccg
tcgggcctgaagcgtggccgctgggaagagctggaagaaaacgacgtgcgcagcttcatg
tcggccttcgggatcgagaagaagggcggcgccggcggcgacggcaagggcaagggcaag
ggcggccagccggccgatccgcgccgttccgacggtaaccgcatcgaccgtgccgacgcg
aatcgcaacgtcgacccgttcgggccgccggtggcgcgcgtcggcgtcccgccgcgcggc
ggccaggcacccgtgggccgtcctgcgggcggcaagggccgaggcggcaacgccggcggc
tttggcggcaatgcgtcgggccgtccgaacagtggcggcagcagccgtccgaagcagccc
gatccgctgcagaccaccttcggctttgccggcaccggtggcggccgtcgcggcggccag
ggtccgcgcgggtccgagcacggtctgccgcgccgcggacgccggggctga
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