Massilia litorea: LPB04_02240
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Entry
LPB04_02240 CDS
T09729
Symbol
rsmB
Name
(GenBank) 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB
KO
K03500
16S rRNA (cytosine967-C5)-methyltransferase [EC:
2.1.1.176
]
Organism
mlir
Massilia litorea
Brite
KEGG Orthology (KO) [BR:
mlir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
mlir03009
]
LPB04_02240 (rsmB)
Enzymes [BR:
mlir01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.176 16S rRNA (cytosine967-C5)-methyltransferase
LPB04_02240 (rsmB)
Ribosome biogenesis [BR:
mlir03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
LPB04_02240 (rsmB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Methyltr_RsmB-F
RsmF-B_ferredox
Methyltr_RsmF_N
Methyltransf_25
FtsJ
DUF6264
NusB
Motif
Other DBs
NCBI-ProteinID:
QOL50168
UniProt:
A0A7L9U590
LinkDB
All DBs
Position
complement(511112..512647)
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AA seq
511 aa
AA seq
DB search
MTDKRPTLTIKPKAASARPTKPAGNPAAQYARPKPAAKPERKLDAKPAAAPNKPAAAPTP
APRPSYEVKPQFQQAYRPDLPGDSLALALLGAASAVAQVRGGTALPQALSNVFAAFGATP
QGRGAIQDLAYRTMRGLGRAETLLGLMTTKAPDVPMLVGLIQCALVLLDPPAGEAPAYEP
FTIVDQAVTAAGNHPDMAHAKAMVNAVLRRFLREREELVATALKQALAQWNYPQWWIDAT
KAAYPRDWEAILAAGNRHPPLTLRVNTRKISLEDYLRQLEQAGLEADQVGPAALRLKQAT
NVSQIPGFHDGLVSVQDAGAQLAAPLLGLEDGMRVLDACAAPGGKSGHILELANVELTAV
DADPQRLARVGDNLGRLGLSATLVAAEAQSKDWWDGQAFDRILADVPCTASGIVRRHPDI
RWLRRKTDTRQLTTLSGEILDNLWQMLRADGKLLFVTCSLWPQESEAQAAAFAARHTDAV
RLDAPGQLLPASGAGLDHDGLFYALFQKRAA
NT seq
1536 nt
NT seq
+upstream
nt +downstream
nt
atgaccgacaagcgcccgacgctcaccatcaagcccaaggccgccagcgccaggccaacc
aagccggccggcaatccggccgcgcagtatgcccggccgaagcctgcggccaagcctgag
cgcaagcttgacgccaagccggcggcggccccgaacaagcccgcagcggccccgacgccc
gccccgcgcccgagctacgaggtaaaaccccagttccagcaggcgtaccggccggacctg
ccgggcgactcgctggccctggcgctgctgggtgccgcgagcgccgtggcccaggtgcgg
ggcggcaccgcgctgccgcaggccttgtcgaacgtgtttgccgccttcggcgccacgccg
caaggccgcggcgcgattcaggacctggcctaccgcacgatgcgcggtctgggacgggcg
gaaaccctgcttggcttgatgacgaccaaggcgccggacgtcccgatgctggtcggcctg
atccagtgcgcgctggtcctgctcgacccgcccgcgggcgaagcgcccgcctatgagccg
ttcacgatcgtggaccaggcggtgacggccgcgggcaaccaccccgatatggcccacgcc
aaggcgatggtgaacgcggtattgcgccgtttcctgcgcgagcgcgaggagctggttgca
accgcattgaaacaagcgctggcgcagtggaactacccgcagtggtggatcgacgccacg
aaggcggcctatccgcgcgactgggaagcgatccttgcggccggcaaccgtcatccgccg
ctgaccctgcgcgtcaatacccgcaagatctcgctcgaggactacctgcgccagctggaa
caggcggggctcgaagccgaccaggtcggcccggccgccctgcgcctgaagcaggcgacc
aacgtgtcgcagatcccgggtttccacgatggcctggtgtcggtacaggacgccggcgcc
cagctggccgcgccgctgctggggctggaggacggcatgcgcgtgctcgacgcctgcgcg
gcgccgggcggcaagagcgggcacatcctggagttggcgaacgtcgagctgaccgcggtc
gatgccgacccgcagcgcctggcacgcgtgggcgacaacctgggccggctcggcctgtct
gccacgctggtggcggccgaagcgcagagcaaggactggtgggatgggcaagcgttcgac
cgcatcctggccgacgtgccgtgcacggcctccggcatcgtgcgccgccacccggacatc
cgctggctgcgccgcaagaccgacacgcgccaacttacaacactttccggggagatactc
gacaatctttggcagatgctgcgggccgatggtaaattgctgtttgtgacatgttcgctc
tggccccaggaatcggaggcgcaggcggccgcgttcgcggcgcgccacacggatgctgtc
cgcctcgatgcgccagggcagctgctccccgcgagcggcgccgggctcgatcatgacgga
ttgttctacgccttgttccaaaagagagcagcgtaa
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