KEGG   Massilia litorea: LPB04_02420
Entry
LPB04_02420       CDS       T09729                                 
Name
(GenBank) adenosylcobalamin-dependent ribonucleoside-diphosphate reductase
  KO
K00525  ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
Organism
mlir  Massilia litorea
Pathway
mlir00230  Purine metabolism
mlir00240  Pyrimidine metabolism
mlir01100  Metabolic pathways
mlir01232  Nucleotide metabolism
Module
mlir_M00053  Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP
mlir_M00938  Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP
Brite
KEGG Orthology (KO) [BR:mlir00001]
 09100 Metabolism
  09104 Nucleotide metabolism
   00230 Purine metabolism
    LPB04_02420
   00240 Pyrimidine metabolism
    LPB04_02420
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:mlir03400]
    LPB04_02420
Enzymes [BR:mlir01000]
 1. Oxidoreductases
  1.17  Acting on CH or CH2 groups
   1.17.4  With a disulfide as acceptor
    1.17.4.1  ribonucleoside-diphosphate reductase
     LPB04_02420
DNA repair and recombination proteins [BR:mlir03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   Modulation of nucleotide pools
    LPB04_02420
SSDB
Motif
Pfam: Ribonuc_red_lgC Ribonuc_red_lgN TSCPD
Other DBs
NCBI-ProteinID: QOL50203
UniProt: A0A7L9U554
LinkDB
Position
547884..550352
AA seq 822 aa
MNANEKLIGTGLPPQEVSIDVLREKYAKGHETSVAEVRQRVARALAAREAPERRAELTER
FLWAMENGFVPGGRINSAAGLDLKATLINCFVQPVGDSVTGCEDGLPGIYTALAEAAETM
RRGGGVGYDFSAIRPFGSLVHGTRSRASGPVSYMELFDASCRTVESAGARRGAQMGVLRI
DHPDIERFIAAKDSGALSNFNISVGVSDAFMHALEADATFPLVHRAEPGEELLAAGAHQR
EDGLWVYREVRARTLWDSIMASTYDHAEPGVLFIDRMNAENNLWYCERLRATNPCGEQPL
PAYGCCDLGSINLTCFVDGPFSEDARFDFERMREVAAVAVRMLDLVLDATEWPLPQQALE
ARAKRRIGLGFLGLGSALVMLGLRYDAPEGRALAARIAEALRDAAYAASNELAREKGAFP
LFDAARYLEGAFVARLPHDLREAIRVHGIRNSHLLSIAPTGTIALAFADNASNGIEPAYS
WTYQRKKRMPDDSMRAYEVQDHAWRLYLRLDPDATPDGPLPPQFVTALQMSADDHLRMLE
AVQPYIDTSISKTVNVPVDYPYDDFRGLYLEAWRAGLKGLATYRPNTVLGSVLGTVADAG
PAAQDEDPLRKRFDGRPLGELDSVTSKIEYSTQEGRKTLYLTVSFIRAEGVIDGLPVTIE
RPFEFFMPANQRSDGQQWITSSMRLLSMLARAGGPIAKALADMRDVVWEKGPVRCGFLTR
EDGTRVPVFHDSEAAAVGFMLQRILIGRGFLDSQGNQVPVPQLARQLAARGGSVDMAPPE
PTAASAPPPALGAKCPECGARALRKIDGCTRCDNCQYVGECG
NT seq 2469 nt   +upstreamnt  +downstreamnt
atgaatgcaaacgaaaaattgatcggcacgggcttgcctccacaagaggtgtcgatcgac
gtactgcgcgaaaaatacgcgaaaggccacgagacctcggtcgccgaggtgcgccagcgc
gtggcccgcgcccttgccgcgcgagaagcccctgaacgccgcgccgaactcaccgaacgt
tttctgtgggccatggaaaacggtttcgttccgggcggacgcatcaactccgccgccggc
ctcgatctcaaagctaccctcatcaattgtttcgtccagccggtaggcgattccgtcacc
ggctgcgaagatggcctgcccggcatctacacggcgctggccgaggcagcggaaacgatg
cgccgcggcggcggcgtcggttacgacttcagcgccatccgccccttcggcagcctcgtc
cacggcacccgctcgcgcgcctccggaccggtctcgtacatggaattgttcgacgcctcc
tgccgcacggtggaatcggccggcgcccggcgcggcgcccagatgggggtgctgcgcatc
gaccatcccgacatcgaacggtttatcgcggccaaggacagcggcgccctctcgaatttc
aatatctcggtcggcgtcagcgacgccttcatgcatgcgctggaagcggacgccaccttc
ccgctggtgcaccgcgccgagccgggagaagaactgcttgcggcaggcgcgcatcaacgc
gaggacggcctctgggtctaccgcgaagtgcgcgccaggacgctctgggacagcatcatg
gcctcgacctatgatcacgcggagccgggcgtgctgttcatcgaccgcatgaacgccgag
aacaacctctggtattgcgagcggctgcgcgcgaccaatccctgcggcgagcagccgctg
ccggcctacggctgctgcgatctcggctcgatcaacctcacctgcttcgtcgacgggccc
ttcagcgaggacgcccgcttcgacttcgagcgcatgcgcgaggtcgcggcggtcgcggta
cgcatgctcgacctggtgctggacgccaccgagtggcccttgccacagcaggcgctcgag
gcgcgcgccaagcgccgcatcggcctcggcttcctcggcctgggcagcgcactggtcatg
ctgggcctgcgctacgacgcgcccgagggccgcgcactggccgcacggatcgccgaagcg
ctgcgcgatgcggcgtatgcggcgtcaaatgaactggcgcgcgaaaaaggcgcctttccc
ctgttcgatgcggcgcgctacctggaaggcgccttcgtggcgcgcctgccgcacgacctg
cgtgaagcgatccgcgtgcatggcatccgcaactcccacctgctctcgatcgcgccgacc
ggcacgattgcgctggcctttgccgacaatgcctcgaacggcatcgagcccgcctactcc
tggacctatcagcgcaagaagcggatgccggacgattcgatgcgcgcctacgaggtgcag
gaccacgcctggcgcctttatctgcgcctcgatcccgatgccacgccggacggtccgctg
ccgccgcagttcgtcaccgccctgcagatgagcgccgacgaccacctgcgcatgctagaa
gcggtccagccctacatcgacacctcgatctcgaagacggtgaacgtgccggtcgattat
ccgtatgacgatttccgcggcctgtacctggaagcctggcgcgccggcttgaaggggctg
gcgacctatcggccgaacacggtgctgggcagcgtgctgggaacggtggccgacgccggc
ccggccgcccaggacgaggatccgctgcgcaagcgcttcgacggccgtccgctgggcgaa
ctcgattcggtcacctcgaagatcgagtattcgacccaggaaggccgcaagaccctgtac
ctgacggtgagcttcatccgggccgagggtgtgatcgacggcttgccggtgacgatcgag
cgccccttcgaattcttcatgccggccaaccagcgcagcgacggccagcaatggatcacc
tcctcgatgcgcctgctctcgatgctggcgcgcgccggcgggccgatcgccaaggcgctg
gccgacatgcgcgacgtggtctgggaaaagggcccggtgcgctgcggttttctcacgcgc
gaggacggcacgcgggtgccggtgtttcacgactcggaggcggccgcggtcggcttcatg
ctgcagcggatcctgattggacgcggcttcctcgacagccagggcaatcaggtaccggtg
ccgcaactggcgcgccagctcgccgcgcgtggcggttcagtcgatatggcgccgcccgag
cccacggcggcaagcgcgccgccgccggccctgggtgcgaaatgccccgaatgcggcgcc
cgcgcgctgcgcaagatcgacggctgcacgcgctgcgacaactgccagtacgtgggcgaa
tgcggctga

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