Massilia litorea: LPB04_02545
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Entry
LPB04_02545 CDS
T09729
Name
(GenBank) sigma 54-interacting transcriptional regulator
KO
K14414
transcriptional regulatory protein RtcR
Organism
mlir
Massilia litorea
Brite
KEGG Orthology (KO) [BR:
mlir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mlir03000
]
LPB04_02545
Transcription factors [BR:
mlir03000
]
Prokaryotic type
Other transcription factors
Others
LPB04_02545
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RtcR
Sigma54_activat
Sigma54_activ_2
Mg_chelatase
AAA_5
AAA
AAA_16
NACHT
AAA_22
AAA_14
AAA_7
AAA_2
AAA_19
MCM
AAA_30
ATPase_2
BrxC_BrxD
AAA_29
Motif
Other DBs
NCBI-ProteinID:
QOL50217
UniProt:
A0A7L9U5K3
LinkDB
All DBs
Position
575653..577260
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AA seq
535 aa
AA seq
DB search
MKKKKTVVIGFVGTKLDNYRGRSRWDKWRPSIALTQHQDLGIARFELLYSGPFESLVEQV
AADIGSVSPDTQVVPHALALRDAWDFEEVYGALFDFAKRYPFDPDNEDYWIHITTGTHVV
QICMFLMTEARFFPGRLVQTSPPRSPGSGTTGSYALIDLDLSRYDQIAQRFSREQMEGVA
FLKSGIATRNADFNTMIDEIERVAIRSRSPMLLMGPTGAGKSFLARRVYELKKARHQVQG
RFVELNCATLHGDGAASTLFGHIKGAFTGAASDRPGLLRSAHKGLLFLDEIGELGPDEQA
MLLKAIEDKRFLPVGSDNEVQSDFQLIAGTNRDLSADVVAGRFREDLYARINLWTYALPS
LRDRAEDIEPNLDYLLAQFGEEQGHMVRFNREARVRYMRFARSPEALWTGNFRDLWASVT
RMATLAQSGRINEAIVGDEVARLQRLWRPYAGRGSPETAGLEALMGHEAASRLDLFDAVQ
LEAVVKVCRQSKSLSDAGRTLFGVSREAKNKPNDADRLKKYLARFKLDWEQVSAI
NT seq
1608 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaagaagaaaaccgtcgtcatcggcttcgtcggcacaaagctcgacaactaccgg
ggccggtcgcgctgggacaagtggcggccgagcatcgcgctgacccagcaccaggacctc
ggcatcgcccgcttcgagttgctgtacagcggcccttttgaaagcctggtggaacaggtt
gcggcggatatcggttcggtgtcgcccgatacgcaggtggttccccatgcgctcgcgctg
cgcgacgcctgggatttcgaagaggtctacggcgcgttgttcgatttcgcgaagcgctac
cccttcgacccggacaatgaggattactggatccatatcacgaccgggacccacgtcgtc
cagatctgcatgttcctgatgaccgaagcgcggtttttccccggccgcctggtgcaaact
tcgccgccacgctcgcccgggtcgggcacgaccggcagctacgcgctgatcgacctcgac
ctgtcgcgctacgaccagatcgcccagcgtttttcgcgcgagcagatggagggcgtcgcc
ttcctgaaatcgggcatcgcgacccgcaatgcggacttcaacacgatgatcgacgaaatc
gagcgcgtcgcgatccgctcacgctcgccgatgctgctgatgggtcccaccggcgcgggg
aaatccttccttgcgcggcgggtctacgagctgaaaaaagcgcgccaccaggtgcaaggc
cgcttcgtcgaactcaattgcgcgacgctgcacggcgacggcgcggcgtcgacgctgttc
ggccacatcaagggcgccttcaccggcgccgcctcggaccgcccaggtttgctcaggagc
gcgcacaagggcctgctcttcctggacgaaatcggagaactcggtccggacgaacaggcg
atgctgctgaaggcgatcgaagacaaacgcttcctgccagtcggcagcgacaacgaggtg
caaagcgatttccagctcatcgccggcaccaaccgcgacctttcggcggacgtggtggcc
ggacgttttcgcgaagacctgtacgcgcgcatcaatctctggacctatgccctgcccagc
ctgcgcgaccgtgccgaggatatcgaaccgaatctcgattacctgctcgcccagttcggc
gaggaacaggggcacatggtccgcttcaaccgcgaagcacgcgtgcgctacatgcgcttc
gcacgttcgccggaagcgctgtggacggggaacttccgcgatctgtgggcgtcggtgacg
cgcatggccacgctggcacagtcgggccgcatcaacgaagcgatcgtgggcgacgaagtg
gcgcgcctgcagcgcctgtggcgtccttatgccggacgcggcagtccggagaccgccggg
ctggaagcactgatgggccacgaggcggcaagcaggctggatctgttcgacgcggtgcag
ctcgaggcggtggtcaaggtgtgccggcagtcgaagagtctgtccgatgccgggcgcacc
ttgtttggcgtgtcgcgcgaggccaaaaataagcccaacgatgcggaccggctcaaaaaa
tacctggcgcgctttaagctggactgggaacaagtgtccgcgatttga
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