Massilia litorea: LPB04_03720
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Entry
LPB04_03720 CDS
T09729
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
mlir
Massilia litorea
Pathway
mlir00300
Lysine biosynthesis
mlir00470
D-Amino acid metabolism
mlir01100
Metabolic pathways
mlir01110
Biosynthesis of secondary metabolites
mlir01120
Microbial metabolism in diverse environments
mlir01230
Biosynthesis of amino acids
Module
mlir_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
mlir00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
LPB04_03720 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
LPB04_03720 (lysA)
Enzymes [BR:
mlir01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
LPB04_03720 (lysA)
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Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
QOL50430
UniProt:
A0A7L9U6C6
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All DBs
Position
845076..846353
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AA seq
425 aa
AA seq
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MSHFSYRDGVLHAESIPLSRVAEEFGTPTYVYSKAALLQNFAAYADACQGRDALVCYAMK
ANSNLAILDLLAREGAGFDIVSGGELLRVIAAGGDPDKVIFSGVGKTEAEMRLALEKGIL
CFNVESIPELHRLNEVAAGMGKRAPVSLRVNPNVDAKTHPYIATGLKANKFGVAFDDALA
TYRAAASLPNLDVVGIDCHIGSQLLDDAPLLEALDKLIELIDTLDAEGIHIHHLDIGGGV
GVDYGAPGDKPPVPVGDYLGRLFARIDAWRAARHDGRAVKVIFEPGRSIVANTGVLVTKV
EFLKPGAEKNFAIIDAAMNDMMRPTLYGAWMDMKPVVPREGEKAVYDVVGPVCESGDWLA
KERELAVEPGDLLAMMSAGAYGMTMASNYNTRGRAAEIMVDGEQVHVIRQRENPADLFAL
ESMLK
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcacttttcgtaccgagacggcgtcctgcacgccgagagcatccctttgtcccgc
gttgccgaagagttcggaacgcccacttatgtctattcgaaagcggcgctgctgcagaat
ttcgcagcgtacgccgatgcctgccagggccgcgatgccctggtctgctatgcgatgaag
gccaattcgaatctcgccatcctcgacctgctggcgcgcgaaggcgccggcttcgacatc
gtctcgggcggcgaactgctgcgcgtgatcgcggccggcggcgatccagataaagtgatc
ttctcgggcgtgggcaagaccgaagctgaaatgcgcctggcgctggaaaaaggcatcctc
tgcttcaacgtcgagtcgatcccggaactgcaccgcctgaacgaggtcgcggccggcatg
ggcaagcgcgccccggtctcgctgcgggtgaacccgaacgtggacgccaagacccacccg
tatatcgcgaccggcctgaaggcaaacaagtttggcgtggctttcgatgacgcgctcgcc
acctaccgcgccgccgcgtctctccccaacctggacgtggtcggtatcgactgccacatc
ggttcgcagctgctggacgacgcgccgctgctggaagcgctcgataaactgatcgaactg
atcgacacgctcgacgccgagggcatccacatccaccacctcgacatcggcggcggcgtc
ggcgtcgattacggtgcgcccggcgacaagccgccggtgccggtgggcgactacttggga
cgcctgttcgcgcgcatcgacgcctggcgcgcggcgcgccacgacggccgtgccgtcaag
gtcatttttgagccgggccgttcgatcgtcgccaacaccggcgtgctggtcaccaaagtc
gagttcctgaaacccggcgcggaaaagaatttcgccatcatcgacgccgccatgaacgac
atgatgcgcccgacgctctacggcgcctggatggacatgaagccggtcgtgccgcgcgaa
ggtgaaaaagccgtgtacgacgtcgtcggcccggtctgcgaatcgggagactggctggcg
aaagagcgtgaactggccgtcgagccgggcgatttgctggcgatgatgagcgcaggcgcc
tacggcatgacgatggcctcgaactacaacacgcgcggccgcgcggccgaaatcatggtc
gacggcgagcaggtgcacgtgattcgccagcgcgagaatccggcggacctgtttgcgctg
gaatcgatgctgaaataa
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