Massilia litorea: LPB04_06230
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Entry
LPB04_06230 CDS
T09729
Name
(GenBank) AMP-binding protein
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
mlir
Massilia litorea
Pathway
mlir00061
Fatty acid biosynthesis
mlir00071
Fatty acid degradation
mlir01100
Metabolic pathways
mlir01212
Fatty acid metabolism
mlir02024
Quorum sensing
mlir04146
Peroxisome
Module
mlir_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
mlir00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
LPB04_06230
00071 Fatty acid degradation
LPB04_06230
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
LPB04_06230
09145 Cellular community - prokaryotes
02024 Quorum sensing
LPB04_06230
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
mlir01004
]
LPB04_06230
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
mlir04147
]
LPB04_06230
Enzymes [BR:
mlir01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
LPB04_06230
Lipid biosynthesis proteins [BR:
mlir01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
LPB04_06230
Exosome [BR:
mlir04147
]
Exosomal proteins
Exosomal proteins of breast milk
LPB04_06230
Exosomal proteins of breast cancer cells
LPB04_06230
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
Motif
Other DBs
NCBI-ProteinID:
QOL50881
UniProt:
A0A7L9U751
LinkDB
All DBs
Position
complement(1397499..1399454)
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AA seq
651 aa
AA seq
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METSESVPLQTFPRRLLAHGQQRGARPAFREKYLGIWQEWSWLQVNAEVRSLACGLAALG
FERGMNLAIIGDNRPRLYWAMLAAQCLGGVPVPLYQDAPAADMAHVLNDADIEFAVVEDQ
EQVDKLLELQALCPRVRRIVFEDERGMRHYRHAGLLSFAALQEMGRAWDAAHPGAFDAAV
QSGQGSDTAIILYTSGTTGKPKGVMQSHAALIAAGEGGVGFDKLTEREDILSYLPMAWVG
DCLFSLAQAMVAGFTVNCPESSDTVLTDLREIGPTYYFAPPRVFENMLTTVMIRMEDAGA
IKRRMFDYFMAVARRSGAAILDGKPVGALERLNYALGRLFVYEPLKNVLGLSRVRIAYTA
GAAIGPDLFRFYRSIGINLKQLYGSTETCAYVCLQPDGNIKFDSVGIPAPGVEVRLAENG
EVLVKGVSNMDGYFKRPDATAEVIDSDGYFHTGDAGMFDSDGHLKIIDRAADVGRMNGGA
IFAPNYIENKLKFFPFIKEAVAFGNGRDQVCAFLNIDMEAVGNWAERRNLAYSGYTDLAA
NPQVLELMRDCVQKVNADLANEALMGQTQIHRFLVLHKELDPDDDELTRTRKVRRKFVAQ
KYAVLIEALYTGKTSQFISTQVKFEDGRSGVVSAELRIVDAATYPVLQEAA
NT seq
1956 nt
NT seq
+upstream
nt +downstream
nt
atggagacatcggagagcgtgcccttgcagactttcccgcggcgcctgctcgcccacggg
caacagcgcggcgcacgcccggcgtttcgcgagaaatacctgggcatctggcaggaatgg
tcctggctgcaggtcaatgccgaggtgagatctctcgcctgcgggctggccgcgctcggt
ttcgaacgcggcatgaacctggccatcatcggcgacaatcggccgcgcctgtactgggcg
atgttggcggcccagtgcctgggcggcgtgccggtcccgctctaccaggatgcgccggcg
gccgacatggcgcatgtgctgaacgacgccgatatcgagttcgctgtggtcgaagaccag
gagcaggtcgataaactgctcgaactgcaggccctgtgcccgcgcgtgcgccgcatcgtg
ttcgaggacgaacgcggcatgcgccattatcggcacgccggcctgctgtcgtttgccgcc
ctccaggaaatgggacgcgcctgggatgcggcccaccccggcgccttcgacgccgcggtt
caaagcggccaaggcagcgacaccgccatcatcctctacacctcgggcaccaccggcaag
ccgaagggcgtgatgcagtcgcacgcggccctgatcgcggcgggcgaaggcggggtcggc
ttcgacaagctgaccgaacgcgaggacatcctttcctacctgccgatggcctgggtcggc
gattgcctgttttcgctggcgcaggcgatggtcgccggttttacggtgaactgcccggag
tcgagcgacacggtgctgaccgacctgcgtgaaatcggcccgacctattattttgcccca
cctcgcgtgttcgagaacatgctcaccaccgtcatgatccggatggaagacgcgggcgcc
atcaaacgccgcatgttcgactatttcatggccgtggcgcgccgcagcggcgccgccatc
ctggacggcaagccggtcggcgccctggaacggcttaactatgcgctgggccggctgttc
gtctacgagccgctgaaaaacgtgctgggcctgtcgcgcgtgcgcatcgcctacaccgcg
ggcgcggccatcggtcccgacctgttccgtttctatcgctcgatcgggatcaatttaaag
cagctgtatggctcgaccgaaacctgcgcctatgtctgcctgcagccggacgggaacatc
aagttcgacagcgtcggtattcccgcgcccggggtcgaggtgcgcctcgccgagaacggc
gaagtactggtaaaaggcgtgtcgaacatggatggctattttaaaaggccggacgcgacg
gccgaagtgatcgacagcgacggttattttcacaccggggacgccggcatgttcgacagc
gatgggcatctgaaaatcatcgaccgcgcggccgatgtcggcaggatgaacggcggcgcc
atcttcgcgcccaactacatcgaaaataaactgaagttcttcccgttcatcaaggaggcg
gtcgccttcggcaatgggcgcgaccaggtctgtgctttcctgaatatcgacatggaagcg
gtcggcaactgggccgagcggcgcaacctcgcctattccggctacacggatctggcggcc
aatccgcaggtgctggaactgatgcgcgactgcgtacagaaagtgaatgccgatctcgcg
aatgaagcgctgatgggacaaacgcagatccaccgttttttagtgttgcacaaggaactc
gatccggacgacgacgagctgacccgcacgcgcaaggtgaggagaaaattcgtcgcccaa
aaatacgccgtgctgatcgaggcgctgtacacgggcaagacttcgcagttcatcagcacg
caggtcaaattcgaggacgggcgcagcggtgtcgtcagcgccgagctgcgcatcgtcgat
gccgctacctatcccgtgctgcaggaggcggcgtga
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