Massilia litorea: LPB04_07995
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Entry
LPB04_07995 CDS
T09729
Symbol
thpR
Name
(GenBank) RNA 2',3'-cyclic phosphodiesterase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
mlir
Massilia litorea
Brite
KEGG Orthology (KO) [BR:
mlir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mlir03016
]
LPB04_07995 (thpR)
Enzymes [BR:
mlir01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
LPB04_07995 (thpR)
Transfer RNA biogenesis [BR:
mlir03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
LPB04_07995 (thpR)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
Motif
Other DBs
NCBI-ProteinID:
QOL51197
UniProt:
A0A7L9U8J6
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All DBs
Position
complement(1799578..1800102)
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AA seq
174 aa
AA seq
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MDGVPSTRLFLALWPDPAIRHALRERRDAWDWPRGASPVHTDKLHMTLHFLGELPSERVP
ELQRGFAVPFTPFTLSIGVPKLWAHGVAVLEPHEEPPELLELHANLSSALVALGLQPEAR
TYRPHVTLARRANNVVVPPETEPLVWKIDGYALVESKPGNGGGYTVIQQYGTAA
NT seq
525 nt
NT seq
+upstream
nt +downstream
nt
atggacggcgtcccgagcacccgcctgttcctggcgctgtggccggatcccgcgatccgc
cacgcgctgcgtgaacggcgtgacgcctgggactggccgcgcggcgccagcccggtgcat
acggacaaactgcacatgacactgcacttcctgggcgaattgccgagcgagcgggtgccg
gagctgcagcgcgggtttgcggtgccatttaccccgttcacgctgtcgatcggcgtgccg
aaactgtgggcacatggcgtggccgtgctggaaccgcacgaggagccgcccgagttgctc
gaactgcatgcgaatttatcgtctgccctggtcgcgctcggcttgcagccggaagcgcgc
acctatcgcccgcacgtgacgctggcgcggcgtgccaacaatgtggtcgtgccgccggag
accgagccgctggtctggaagatcgacggctatgcattggtcgaatcgaagcccggcaat
ggcggcggctatacggtgattcagcaatacggaaccgctgcgtaa
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