Massilia litorea: LPB04_08015
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Entry
LPB04_08015 CDS
T09729
Symbol
pcnB
Name
(GenBank) polynucleotide adenylyltransferase PcnB
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
mlir
Massilia litorea
Pathway
mlir03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mlir00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LPB04_08015 (pcnB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mlir03019
]
LPB04_08015 (pcnB)
Enzymes [BR:
mlir01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
LPB04_08015 (pcnB)
Messenger RNA biogenesis [BR:
mlir03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
LPB04_08015 (pcnB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol_arg_C
PolyA_pol
PolyA_pol_RNAbd
DUF2204
Motif
Other DBs
NCBI-ProteinID:
QOL51201
UniProt:
A0A7L9U817
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All DBs
Position
complement(1801865..1803277)
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AA seq
470 aa
AA seq
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MIKKFIRKILGVKDERDPTEPVVLGPEEHGIDLKLVSPNAIRLTQTLQEAGFKAFVVGGA
VRDLLLGVKPKDFDIATDATPEQVKKLFRRAFIIGRRFQIVHVMFGQELLEVTTFRGNGS
NNAPKDEHGRVLRDNNFGPQHEDAARRDFTINAMYYDPATQSVLDYHGGIADIREKTLRI
IGMPEARYREDPVRMLRVVRFAAKLGFTIEPTTRAPIPVMAPLIDNVPAARVFDEMLKLL
LSGHALACLKELRSAGLHHGLLPLLDVVLEQPIGMKFVTLALESTDSRVKAGKGVSPGFL
FASLLWHQVLEKWTAYRAAGEAPIPALHLAADDVLETQTDNLALQRRIATDMRDIWAMQP
RFERRTGKAPYKLLENPRFRAGYDFLLLRCESGELEMEIGEWWTAFYEAEAGERERLVTQ
ANRPAPVAGEKKKRAPRRGPRNRSSEGADAGAGSNAGSSDSAPTVSNIRE
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
atgattaaaaaattcattcgtaaaatccttggcgtgaaagacgagcgcgaccctaccgaa
ccagtcgtcctcgggccggaagaacacggtatcgatttaaaactcgtgtcgccgaacgcg
atccggctcacgcagaccctgcaggaagccggtttcaaagcctttgtcgtcggcggcgcc
gtgcgcgacctgctgctgggcgtgaaaccgaaagatttcgatatcgccaccgacgccacg
ccggaacaggtgaaaaaattgttccgccgcgccttcatcatcggccgccgcttccagatc
gtgcacgtgatgttcggccaggagctgctggaagtgacgaccttccgcggcaacggcagc
aacaacgcgccgaaggacgagcacggtcgcgtcctgcgcgacaacaatttcggaccgcag
cacgaggacgccgcgcgccgcgatttcaccatcaacgcgatgtactacgatccggccacg
caaagcgtgctggactaccacggcggcattgccgacatccgcgaaaaaaccctgcgcatc
atcggcatgccggaagcgcgctaccgcgaagacccggtgcgcatgctgcgcgtggtgcgc
ttcgcggccaagctcggttttacgatcgagccgaccacgcgcgcgccaatcccggtgatg
gcgcccctgatcgacaacgtgcccgccgcgcgcgtgttcgacgaaatgctgaagttgctg
ctgtcgggccacgcgctggcctgcctgaaggaactgcgttcggccggcctgcaccacggc
ctgctgcccctgctcgacgtggtgctggagcagccgatcggcatgaagttcgtgacgctt
gcgctcgaatccacggattcgcgtgtcaaagccggcaagggcgtgtcgccgggcttcctg
ttcgcctcgctgttgtggcaccaggtgctcgaaaaatggacggcgtatcgggctgccggt
gaggcgccgatcccggccctgcacctggccgccgacgacgtgctggaaacgcaaacggac
aatctcgccctgcagcgccgcatcgccaccgacatgcgcgacatctgggccatgcagccg
cgcttcgaacgccgcaccggcaaggcgccgtacaaattgctcgagaatccgcgcttccgc
gccggttacgacttcctgctgctgcgctgcgagtcgggcgagctggagatggaaatcggc
gagtggtggaccgccttctacgaggccgaagcgggcgaacgcgagcgcctggtcacccag
gccaaccgtccggcgcccgtcgccggcgaaaagaagaagcgcgcgccgcgccgtgggccg
cgcaaccgcagcagtgaaggtgccgatgcaggtgcgggatcgaacgcgggctccagcgac
tccgcaccgaccgtgagcaacatccgggaatga
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