Massilia litorea: LPB04_09095
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Entry
LPB04_09095 CDS
T09729
Name
(GenBank) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
mlir
Massilia litorea
Brite
KEGG Orthology (KO) [BR:
mlir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mlir03400
]
LPB04_09095
Enzymes [BR:
mlir01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
LPB04_09095
DNA repair and recombination proteins [BR:
mlir03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
LPB04_09095
Prokaryotic type
LPB04_09095
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Usp
Motif
Other DBs
NCBI-ProteinID:
QOL51389
UniProt:
A0A7L9UAC6
LinkDB
All DBs
Position
complement(2036533..2037990)
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AA seq
485 aa
AA seq
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MIPKSKSVVWFRRDLRAFDHAALHHALRDATQYGGSVVCVFVFDTGILEGLPRDERRVRF
IHASLRELDAELRKLGGGLMVRHGAAVDEIPRLAAELDARSVYVNEDYEPDAIARDAAVA
ALLEAGGRSLLRFKDQVIFEKNEVLTLAGGIYGVFTPYKNAWLKRLAAQPEAAAPWMIEP
HAGALAPVPEVALPRLAQLGFDDGPLPAPPGMAGASELFEHFLPRLADYGTARDFPALDA
TSRLSIHLRFGTTSVRHLVRTLRQMMANGAGGAGAPVWLSELIWREFYAMILFHHPHIAQ
QSFKPAFDAVAWEAGEPAQALFAAWCEGRTGYPLVDAAMVQLNTTGFMHNRLRMVTASFL
VKDLGIDWRWGERYFARQLNDYDLASNVGGWQWAASTGCDAQPWFRIFNPVTQSQKFDRQ
GEFIKQYLPQLAKLEARDIHAPWLVPADELAACGIVLGRDYPEPIIDHAQARQRTLERFT
VVKGG
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
atgattccgaaaagcaagtctgttgtctggttccggcgcgacttgcgcgccttcgaccac
gccgccctgcaccatgcgttgcgcgatgccacccaatacggcggcagcgtggtctgcgtc
ttcgtgttcgacaccggtatcctggagggcttgccgcgcgacgaacggcgcgtgcgcttc
atccacgccagcctgcgcgaactcgacgccgagctgcgcaaactcggcggcgggctgatg
gtgcgccacggcgccgcggtggacgagatcccgcgcctggccgccgaactcgatgcccgc
agcgtgtacgtcaacgaggattacgaaccggacgcgatcgcccgcgacgcggccgtggcc
gcgctacttgaagccgggggccgtagtctgctgcgcttcaaggaccaggtgattttcgag
aaaaacgaggtgctgaccctggccggcggcatctacggcgtgttcaccccgtataagaac
gcatggctcaagcgcctggccgcccagccggaagcggccgcgccgtggatgatcgaaccg
catgcgggggccctggcgcccgtgcccgaggtggcgctgccccgcctggcgcagctcggg
ttcgatgacggtcccctgcccgctccgcccggaatggcgggggcaagtgaactgttcgaa
cacttcctgccacgcctggctgattacggcacggcgcgcgacttcccggcgctggacgca
acgtctcgcctgtcgattcacctgcgcttcggcactacctcggtacgccacctggtgcgc
acgctgcgccagatgatggccaatggcgccggtggcgcgggcgcgccggtgtggctgtcg
gaactgatctggcgcgagttctacgcgatgatcctgttccaccatccgcatatcgcgcag
cagtcgttcaagccggccttcgatgcggtcgcatgggaagccggcgagccggcgcaggct
ttatttgccgcctggtgcgaaggccgcaccggctatccgctggtggacgcggcgatggtc
cagctgaacacgaccggcttcatgcacaaccggctgcgcatggtaacggccagcttttta
gtaaaagacctcgggatcgactggcgctggggcgagcgctattttgcgcgccaattgaac
gactacgacctggcctcgaacgtcggcggctggcagtgggcggcatcgaccggatgcgat
gcgcagccgtggttccgcatcttcaatccggtgacgcagtcgcagaagttcgaccggcag
ggggagtttataaaacagtacctgccgcagctggcgaagctggaggcgcgggatattcat
gcgccgtggctggtgccggcggatgaattggcggcgtgcgggatcgtgttggggagggat
tatccggagccgatcatcgatcatgcgcaggcgcggcagcggacgctggagcgatttacc
gtcgtcaaaggcgggtga
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