KEGG   Massilia litorea: LPB04_10325
Entry
LPB04_10325       CDS       T09729                                 
Symbol
lpdA
Name
(GenBank) dihydrolipoyl dehydrogenase
  KO
K00382  dihydrolipoyl dehydrogenase [EC:1.8.1.4]
Organism
mlir  Massilia litorea
Pathway
mlir00010  Glycolysis / Gluconeogenesis
mlir00020  Citrate cycle (TCA cycle)
mlir00260  Glycine, serine and threonine metabolism
mlir00280  Valine, leucine and isoleucine degradation
mlir00310  Lysine degradation
mlir00380  Tryptophan metabolism
mlir00620  Pyruvate metabolism
mlir00630  Glyoxylate and dicarboxylate metabolism
mlir00640  Propanoate metabolism
mlir00670  One carbon pool by folate
mlir00785  Lipoic acid metabolism
mlir01100  Metabolic pathways
mlir01110  Biosynthesis of secondary metabolites
mlir01120  Microbial metabolism in diverse environments
mlir01200  Carbon metabolism
mlir01210  2-Oxocarboxylic acid metabolism
mlir01240  Biosynthesis of cofactors
Module
mlir_M00009  Citrate cycle (TCA cycle, Krebs cycle)
mlir_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
mlir_M00036  Leucine degradation, leucine => acetoacetate + acetyl-CoA
mlir_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA
mlir_M00621  Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:mlir00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00010 Glycolysis / Gluconeogenesis
    LPB04_10325 (lpdA)
   00020 Citrate cycle (TCA cycle)
    LPB04_10325 (lpdA)
   00620 Pyruvate metabolism
    LPB04_10325 (lpdA)
   00630 Glyoxylate and dicarboxylate metabolism
    LPB04_10325 (lpdA)
   00640 Propanoate metabolism
    LPB04_10325 (lpdA)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    LPB04_10325 (lpdA)
   00280 Valine, leucine and isoleucine degradation
    LPB04_10325 (lpdA)
   00310 Lysine degradation
    LPB04_10325 (lpdA)
   00380 Tryptophan metabolism
    LPB04_10325 (lpdA)
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    LPB04_10325 (lpdA)
   00670 One carbon pool by folate
    LPB04_10325 (lpdA)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:mlir04147]
    LPB04_10325 (lpdA)
Enzymes [BR:mlir01000]
 1. Oxidoreductases
  1.8  Acting on a sulfur group of donors
   1.8.1  With NAD+ or NADP+ as acceptor
    1.8.1.4  dihydrolipoyl dehydrogenase
     LPB04_10325 (lpdA)
Exosome [BR:mlir04147]
 Exosomal proteins
  Exosomal proteins of breast cancer cells
   LPB04_10325 (lpdA)
SSDB
Motif
Pfam: Pyr_redox_2 Pyr_redox_dim Biotin_lipoyl Pyr_redox NAD_binding_8 GIDA FAD_oxidored Pyr_redox_3 Biotin_lipoyl_2 DAO FAD_binding_3 AlaDh_PNT_C FAD_binding_2 GCV_H Thi4 HI0933_like OMS28_porin DEC-1_N 3HCDH_N
Other DBs
NCBI-ProteinID: QOL51606
UniProt: A0A7L9UBW0
LinkDB
Position
2333502..2335319
AA seq 605 aa
MSTVEVKVPNIGDFKDVEIIELMVKPGDTIKVDQSLVTVESDKASMEIPSTHAGVVKELS
VKVGDKVNEGSLLLMLEEGAGAAAPAAPAAAPAAAPTAAAAPTDSYAPAHKADAAAPASA
PVPGAASYSGQVDIECEMMVLGAGPGGYSAAFRSADLGMNTVLVEKYATLGGVCLNVGCI
PSKALLHVAHIMDETAHMADLGVSFAAPSVDIDKLRGYKDGVIKKMTGGLSFMAKARKVN
VVQGVGQFLSPNHIEVTAADGAKKVVKFAKAIIAAGSSVVKLPFVPEDPRIVDSTGALEL
RQVPKKMLVIGGGIIGLEMATVYSTLGARIDVVEMMDGLMQGADREAVKVWQKYNAHRFD
NIMLKTKTVGVEALPEGIKVSFEAAEAGATAPEPQLYDLVLVAVGRSPNGKKIAAEKAGV
AVTDRGFIGVDGQMRTNVPHIFAIGDLVGQPMLAHKAVHEAHVAAEAAHGEKAYFDAKVI
PSVAYTDPEVAWAGLTEDEAKQKGIKVEKGHFPWNASGRAVANGRDEGFTKLLFDTETGR
IIGGTIVGTNAGDMIGEIALAIEMGADGVDIGKTIHPHPTLGESIGMAAEVYKGVCTDLP
PARKR
NT seq 1818 nt   +upstreamnt  +downstreamnt
atgagcactgttgaagtaaaagtcccgaacatcggcgatttcaaggacgtcgaaatcatc
gaactgatggtcaagcccggcgacacgatcaaggtcgaccagtcgctggtcaccgtggaa
tccgacaaggcctcgatggaaatcccgtcgacccacgccggcgtggtcaaggaactgtcg
gtcaaggtgggcgacaaggtgaacgaaggttcgctgctgctgatgctcgaagagggggcc
ggggctgctgcacctgctgctccggccgctgcgcctgcagctgcgccgaccgccgctgcc
gcaccgaccgattcgtatgcgccagcgcacaaggctgacgccgccgctcccgcgagcgcg
cccgttccgggcgccgccagctacagcggccaggtcgacatcgaatgcgaaatgatggtg
ctgggcgccggtcccggcggctattcggccgctttccgttccgccgacctcggcatgaac
acggtgctggtcgagaagtacgcgaccttgggcggcgtctgcctgaacgtgggctgcatt
ccgtccaaggcactgctgcacgtggcgcacatcatggacgagaccgcgcacatggccgac
ctgggcgtgagctttgccgcaccaagcgtcgacatcgacaagctgcgcggctacaaggac
ggcgtcatcaagaagatgaccggcggcctctccttcatggccaaggcgcgcaaggtgaat
gtggtgcagggcgtgggccagttcctgagcccgaaccacatcgaagtcaccgctgccgac
ggcgcgaagaaggtggtgaagttcgcgaaagcgatcatcgccgccggatcgagcgtggta
aaactgcctttcgtgccggaagacccgcgcatcgtcgactcgaccggcgcgctggaactg
cgccaggtaccgaagaagatgctggtcatcggcggcggcatcatcggcctggaaatggca
accgtctactcgaccctcggtgcacgcatcgacgtcgtcgagatgatggatggcctgatg
cagggcgcggaccgcgaggcggtgaaagtctggcagaagtacaacgcgcaccgcttcgac
aacatcatgctcaagacgaagaccgtcggcgtggaggccctccctgaaggcatcaaggtc
agcttcgaagcggcggaagccggcgccaccgcgccggaaccgcagctgtacgacctggtg
ctggtggccgtcggccgcagcccgaacggtaaaaaaatcgccgccgagaaggccggcgtg
gcggtgaccgaccgcggcttcatcggcgtggacggccagatgcgcaccaacgtgccgcat
atcttcgccattggcgacctggtgggccagccgatgctggcgcacaaggcggtgcacgaa
gcgcacgtcgcggcggaagcggcgcacggcgagaaggcatacttcgatgcgaaagtcatt
ccgtcggtcgcctacaccgatccggaagtggcatgggccggcctcacggaagacgaagcc
aagcagaagggcatcaaggtcgagaagggccacttcccgtggaacgcgagcggccgcgcg
gtcgccaacggccgcgacgaaggcttcaccaagctgctgttcgacaccgagaccggtcgc
atcatcggcggcaccatcgtcggcacgaatgccggcgacatgatcggcgaaatcgcgctg
gcgatcgagatgggcgccgacggcgtcgacatcggcaagaccatccacccgcacccgacg
ctgggcgagtcgatcggcatggccgccgaagtctacaagggcgtctgcaccgacctgccg
ccggcacgcaagcgctga

DBGET integrated database retrieval system