Massilia litorea: LPB04_10520
Help
Entry
LPB04_10520 CDS
T09729
Name
(GenBank) RsmB/NOP family class I SAM-dependent RNA methyltransferase
KO
K03500
16S rRNA (cytosine967-C5)-methyltransferase [EC:
2.1.1.176
]
Organism
mlir
Massilia litorea
Brite
KEGG Orthology (KO) [BR:
mlir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
mlir03009
]
LPB04_10520
Enzymes [BR:
mlir01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.176 16S rRNA (cytosine967-C5)-methyltransferase
LPB04_10520
Ribosome biogenesis [BR:
mlir03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
LPB04_10520
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Methyltr_RsmB-F
RsmF-B_ferredox
Methyltransf_31
Ubie_methyltran
Methyltr_RsmF_N
MTS
Methyltransf_25
GCD14
Methyltransf_33
Cons_hypoth95
TRM5-TYW2_MTfase
FtsJ
Methyltransf_24
Motif
Other DBs
NCBI-ProteinID:
QOL51642
UniProt:
A0A7L9UBN4
LinkDB
All DBs
Position
2375086..2376402
Genome browser
AA seq
438 aa
AA seq
DB search
MRLPPAILGSTEEVLREILRFTAPADVTLSRYFKDHQRLGSRERGVVAEAVYAVLRNKTF
FTDFGGTGGTPSMRRLALMGLAETAGIESLSGLHEDETEFLTRIKEIDRSLLPPLAQANM
PQWLYDKLVAQYGESEAKELAAVLNTPAPLDLRVNSIKANRDEVIAKLAEAPIVAEPTPF
SPLGLRIKKKPTLQNLPLFKEGAIEVQDEGSQVLAQILAARRGEMVVDFCAGAGGKTLAL
GATMRNTGRLYAFDVSEKRLSKLKPRLARSGLSNVHPVLIAHERDAKIKRLAGKIDRVLV
DAPCSGLGTLRRNPDVKWRQPQSAVAEMQEKQASILDGAARLLKGGGRLVYATCSLLNEE
NDFIVEQFLASHPDFELVPMSKVLAEQKIDLEMDQYLKLLPHKHGTDGFFAAVLERKPMA
PKKPKAETAVAEDTAAEE
NT seq
1317 nt
NT seq
+upstream
nt +downstream
nt
atgagattgccaccagcaattctcggcagtaccgaagaggtattgcgcgagatcttgcgt
tttacggccccggccgacgtcaccctgtcgcgttatttcaaggaccatcagcgtctcggt
tcgcgcgagcgcggcgtcgtcgccgaagcggtgtatgccgtcctgcgcaacaaaaccttc
ttcaccgatttcggcggcaccggcggcacgccctcgatgcgccgcctggccttgatgggc
ctggcggaaacggccgggatcgagtcgctcagcggcctgcacgaggatgagaccgagttc
ctcacccgcatcaaggaaatcgaccgctccctgttgccgccgctggcccaggccaacatg
ccgcagtggctgtacgacaagctcgtcgcccagtatggcgagtccgaggcgaaggaattg
gcggccgtgctgaacacgccggcgccgctggacctgcgcgtcaattcgatcaaggccaat
cgggacgaggtcatcgcgaaattggccgaagcgccgatcgttgccgagccgacgccgttc
tcgccgctcggcctgcgcatcaagaaaaagccgacgctgcagaacctgccgctgttcaag
gaaggcgccatcgaggtgcaggacgagggcagccaggtgctggcccagatcctggccgcg
cgccgcggcgagatggtggtcgacttttgcgccggcgccggcggcaagacgctggccctg
ggcgcgacgatgcgcaacaccggccgcctgtatgccttcgatgtctcggaaaagcgtctg
tcgaagctgaagccacgcctggcgcgcagcggcctgtcgaacgtgcacccggtcctgatc
gcgcacgagcgggatgccaagatcaagcgcctggccggcaagatcgaccgcgtgctggtc
gacgccccgtgctcgggcctcggcaccctgcgccgcaacccggacgtcaagtggcgccag
ccgcaaagcgccgtggcggaaatgcaggaaaagcaggcctcgatcctggacggcgccgcg
cgcctgctcaagggcggcggccgcctggtgtacgccacctgctcgctgctgaacgaagag
aacgattttatcgttgagcaattccttgcctcgcatccggacttcgaattggtgccgatg
agcaaggtgctggccgagcagaagatcgatctcgagatggaccagtacctgaaactcctg
ccgcacaagcatggcaccgacggcttctttgccgccgtgctcgagcgtaagccgatggcg
ccgaaaaagccgaaagccgagaccgccgttgccgaagatacggccgctgaagagtaa
DBGET
integrated database retrieval system
