Massilia litorea: LPB04_10890
Help
Entry
LPB04_10890 CDS
T09729
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
mlir
Massilia litorea
Pathway
mlir00521
Streptomycin biosynthesis
mlir00523
Polyketide sugar unit biosynthesis
mlir00525
Acarbose and validamycin biosynthesis
mlir00541
Biosynthesis of various nucleotide sugars
mlir01100
Metabolic pathways
mlir01110
Biosynthesis of secondary metabolites
mlir01250
Biosynthesis of nucleotide sugars
Module
mlir_M00793
dTDP-L-rhamnose biosynthesis, glucose-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
mlir00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
LPB04_10890 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
LPB04_10890 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
LPB04_10890 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
LPB04_10890 (rfbB)
00525 Acarbose and validamycin biosynthesis
LPB04_10890 (rfbB)
Enzymes [BR:
mlir01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
LPB04_10890 (rfbB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
RmlD_sub_bind
NAD_binding_4
Polysacc_synt_2
3Beta_HSD
KR
Motif
Other DBs
NCBI-ProteinID:
QOL51705
UniProt:
A0A7L9UC07
LinkDB
All DBs
Position
2452213..2453265
Genome browser
AA seq
350 aa
AA seq
DB search
MTILVTGGAGFIGSNFVIDWLAGCDEPLVNLDKLTYAGNRANLAGLEHDPRHRFVQGDIG
DRALVTRLLAEHRVRAVLNFAAESHVDRSIDGPAAFVQTNVAATFNLLEAARGYWSALPD
EERAAWRFLHVSTDEVYGTLGQNDPPFTETTAYAPNSPYSATKAASDHLVRAWHVTYGLP
TLTTNCSNNYGPFQFPEKLIPLVIHQALAGRPLPVYGDGRQVRDWLYVSDHCAAIRRVLE
AGTPGGVWNVGGLNEKTNLEVVHAVCALLDELRPRADGQAYAAQISFVADRPGHDRRYAV
DPSKLRRELGWEPRHDFGSGLRRTVAWYLAHQDWVDALAAGASCARPSAP
NT seq
1053 nt
NT seq
+upstream
nt +downstream
nt
atgaccatcctcgttaccggcggcgccgggttcatcgggtcgaacttcgtcatcgactgg
ctcgccgggtgcgacgagccgctggtcaacctcgacaagctgacctacgccggcaaccgc
gccaacctggccggcctcgaacacgacccgcgccaccgcttcgtgcagggcgacatcggc
gaccgtgcgctggtgacgcgcctgctggccgaacaccgggtgcgcgccgtgctcaatttt
gccgccgaaagccatgtcgaccgctcgatcgacggcccggccgccttcgtgcagacgaac
gtcgccgccaccttcaacctgctcgaagccgcgcgtggctactggagcgcgctgccggac
gaggagcgggcggcctggcgtttcctgcacgtgtcgaccgacgaggtctacggcacgctt
ggccaaaacgatccgccgtttaccgaaaccacggcctacgcgccgaacagcccgtattcg
gccaccaaggcggcctcggaccacctggtacgcgcctggcacgtgacctatggcttgccg
accctgacgaccaactgttcgaacaactacggcccattccagtttcccgaaaaactgatt
ccgctggtgatccaccaggccctcgccggccggccgctgccggtctacggcgacggccgc
caggtgcgcgactggttgtatgtgagcgaccactgcgcggcgatccggcgcgtgctcgaa
gccggcaccccgggcggcgtctggaacgtgggcggcctgaacgagaaaacgaatctggag
gtcgtgcacgccgtctgcgcgctgctcgacgagttgcggccccgtgccgatggccaggcc
tatgcggcgcagatcagcttcgttgccgatcgccccggccacgatcgccgctatgcggtc
gacccgtcgaagctgcggcgcgagctgggctgggagccgcgccacgatttcggcagcggc
ctgcgccggaccgtcgcctggtatctcgcgcaccaggactgggttgatgcgctcgccgcc
ggcgcttcctgcgcgcgccccagcgctccatga
DBGET
integrated database retrieval system