KEGG   Massilia litorea: LPB04_10890
Entry
LPB04_10890       CDS       T09729                                 
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
  KO
K01710  dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
Organism
mlir  Massilia litorea
Pathway
mlir00521  Streptomycin biosynthesis
mlir00523  Polyketide sugar unit biosynthesis
mlir00525  Acarbose and validamycin biosynthesis
mlir00541  Biosynthesis of various nucleotide sugars
mlir01100  Metabolic pathways
mlir01110  Biosynthesis of secondary metabolites
mlir01250  Biosynthesis of nucleotide sugars
Module
mlir_M00793  dTDP-L-rhamnose biosynthesis, glucose-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:mlir00001]
 09100 Metabolism
  09107 Glycan biosynthesis and metabolism
   00541 Biosynthesis of various nucleotide sugars
    LPB04_10890 (rfbB)
  09109 Metabolism of terpenoids and polyketides
   00523 Polyketide sugar unit biosynthesis
    LPB04_10890 (rfbB)
   01055 Biosynthesis of vancomycin group antibiotics
    LPB04_10890 (rfbB)
  09110 Biosynthesis of other secondary metabolites
   00521 Streptomycin biosynthesis
    LPB04_10890 (rfbB)
   00525 Acarbose and validamycin biosynthesis
    LPB04_10890 (rfbB)
Enzymes [BR:mlir01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.1  Hydro-lyases
    4.2.1.46  dTDP-glucose 4,6-dehydratase
     LPB04_10890 (rfbB)
SSDB
Motif
Pfam: GDP_Man_Dehyd Epimerase RmlD_sub_bind NAD_binding_4 Polysacc_synt_2 3Beta_HSD KR
Other DBs
NCBI-ProteinID: QOL51705
UniProt: A0A7L9UC07
LinkDB
Position
2452213..2453265
AA seq 350 aa
MTILVTGGAGFIGSNFVIDWLAGCDEPLVNLDKLTYAGNRANLAGLEHDPRHRFVQGDIG
DRALVTRLLAEHRVRAVLNFAAESHVDRSIDGPAAFVQTNVAATFNLLEAARGYWSALPD
EERAAWRFLHVSTDEVYGTLGQNDPPFTETTAYAPNSPYSATKAASDHLVRAWHVTYGLP
TLTTNCSNNYGPFQFPEKLIPLVIHQALAGRPLPVYGDGRQVRDWLYVSDHCAAIRRVLE
AGTPGGVWNVGGLNEKTNLEVVHAVCALLDELRPRADGQAYAAQISFVADRPGHDRRYAV
DPSKLRRELGWEPRHDFGSGLRRTVAWYLAHQDWVDALAAGASCARPSAP
NT seq 1053 nt   +upstreamnt  +downstreamnt
atgaccatcctcgttaccggcggcgccgggttcatcgggtcgaacttcgtcatcgactgg
ctcgccgggtgcgacgagccgctggtcaacctcgacaagctgacctacgccggcaaccgc
gccaacctggccggcctcgaacacgacccgcgccaccgcttcgtgcagggcgacatcggc
gaccgtgcgctggtgacgcgcctgctggccgaacaccgggtgcgcgccgtgctcaatttt
gccgccgaaagccatgtcgaccgctcgatcgacggcccggccgccttcgtgcagacgaac
gtcgccgccaccttcaacctgctcgaagccgcgcgtggctactggagcgcgctgccggac
gaggagcgggcggcctggcgtttcctgcacgtgtcgaccgacgaggtctacggcacgctt
ggccaaaacgatccgccgtttaccgaaaccacggcctacgcgccgaacagcccgtattcg
gccaccaaggcggcctcggaccacctggtacgcgcctggcacgtgacctatggcttgccg
accctgacgaccaactgttcgaacaactacggcccattccagtttcccgaaaaactgatt
ccgctggtgatccaccaggccctcgccggccggccgctgccggtctacggcgacggccgc
caggtgcgcgactggttgtatgtgagcgaccactgcgcggcgatccggcgcgtgctcgaa
gccggcaccccgggcggcgtctggaacgtgggcggcctgaacgagaaaacgaatctggag
gtcgtgcacgccgtctgcgcgctgctcgacgagttgcggccccgtgccgatggccaggcc
tatgcggcgcagatcagcttcgttgccgatcgccccggccacgatcgccgctatgcggtc
gacccgtcgaagctgcggcgcgagctgggctgggagccgcgccacgatttcggcagcggc
ctgcgccggaccgtcgcctggtatctcgcgcaccaggactgggttgatgcgctcgccgcc
ggcgcttcctgcgcgcgccccagcgctccatga

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