KEGG   Massilia litorea: LPB04_12650
Entry
LPB04_12650       CDS       T09729                                 
Symbol
lpdA
Name
(GenBank) dihydrolipoyl dehydrogenase
  KO
K00382  dihydrolipoyl dehydrogenase [EC:1.8.1.4]
Organism
mlir  Massilia litorea
Pathway
mlir00010  Glycolysis / Gluconeogenesis
mlir00020  Citrate cycle (TCA cycle)
mlir00260  Glycine, serine and threonine metabolism
mlir00280  Valine, leucine and isoleucine degradation
mlir00310  Lysine degradation
mlir00380  Tryptophan metabolism
mlir00620  Pyruvate metabolism
mlir00630  Glyoxylate and dicarboxylate metabolism
mlir00640  Propanoate metabolism
mlir00670  One carbon pool by folate
mlir00785  Lipoic acid metabolism
mlir01100  Metabolic pathways
mlir01110  Biosynthesis of secondary metabolites
mlir01120  Microbial metabolism in diverse environments
mlir01200  Carbon metabolism
mlir01210  2-Oxocarboxylic acid metabolism
mlir01240  Biosynthesis of cofactors
Module
mlir_M00009  Citrate cycle (TCA cycle, Krebs cycle)
mlir_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
mlir_M00036  Leucine degradation, leucine => acetoacetate + acetyl-CoA
mlir_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA
mlir_M00621  Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:mlir00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00010 Glycolysis / Gluconeogenesis
    LPB04_12650 (lpdA)
   00020 Citrate cycle (TCA cycle)
    LPB04_12650 (lpdA)
   00620 Pyruvate metabolism
    LPB04_12650 (lpdA)
   00630 Glyoxylate and dicarboxylate metabolism
    LPB04_12650 (lpdA)
   00640 Propanoate metabolism
    LPB04_12650 (lpdA)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    LPB04_12650 (lpdA)
   00280 Valine, leucine and isoleucine degradation
    LPB04_12650 (lpdA)
   00310 Lysine degradation
    LPB04_12650 (lpdA)
   00380 Tryptophan metabolism
    LPB04_12650 (lpdA)
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    LPB04_12650 (lpdA)
   00670 One carbon pool by folate
    LPB04_12650 (lpdA)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:mlir04147]
    LPB04_12650 (lpdA)
Enzymes [BR:mlir01000]
 1. Oxidoreductases
  1.8  Acting on a sulfur group of donors
   1.8.1  With NAD+ or NADP+ as acceptor
    1.8.1.4  dihydrolipoyl dehydrogenase
     LPB04_12650 (lpdA)
Exosome [BR:mlir04147]
 Exosomal proteins
  Exosomal proteins of breast cancer cells
   LPB04_12650 (lpdA)
SSDB
Motif
Pfam: Pyr_redox_2 Pyr_redox_dim Pyr_redox Pyr_redox_3 FAD_oxidored FAD_binding_2 AlaDh_PNT_C GIDA HI0933_like NAD_binding_8 FAD_binding_3 3HCDH_N Amino_oxidase DAO Thi4
Other DBs
NCBI-ProteinID: QOL47875
UniProt: A0A7L9U104
LinkDB
Position
2836990..2838423
AA seq 477 aa
MSNEKQFDVVVIGGGPGGYIAAIRAAQLGFKTACIDEWSNAAGKPAPGGTCTNVGCIPSK
ALLQSSEHFEHAGHAFAEHGINVAGLELNLPQMLKRKDTIVKQNNDGILFLFKKNKVTFF
HGRGAFAGKAEGGYTINVTGPTTDTLTAKNVVVATGSNARQLPGAEFDEKLILSNTGALA
IDAVPSKLGVIGAGVIGLEMGSVWRRVGADVTVLEGLPTFLGAVDEQIAKEAHKLFTKQG
LKINLGCKIGAITKGENNVTVQYADSTGAEQTATFDRLIISIGRVPNTIGLNGESVGLQL
DERGFVVVDDECRTSLPGVWAVGDVVRGPMLAHKAEEEGVAVAERIAGQHGHVNFNTIPW
VIYTSPEIAWVGKTEQQLKAEGVAYKAGTFPFMANGRARALGDTSGMVKFLADATTDEIL
GVHIVGPVASELISEAVVAMEFKASSEDIARICHAHPSLSEAVKEAALAVDKRSLNF
NT seq 1434 nt   +upstreamnt  +downstreamnt
atgagtaacgagaaacaattcgacgtcgtcgtcatcggcggcggccctggcggctatatc
gctgccatccgcgcagcccagctcggcttcaagacggcctgtatcgacgagtggagcaac
gcggcaggcaagccggctccaggcggcacctgcaccaacgtcggctgcatcccgtcgaaa
gcgctgctgcaatcgtcggaacacttcgagcacgccggccacgccttcgccgagcacggc
atcaatgtcgccggcctggaactgaacctgccgcaaatgctcaagcgcaaggacaccatc
gtcaagcagaacaacgacggcatcctgttcctgttcaagaagaacaaggtcaccttcttc
cacggccgcggcgccttcgccggcaaggccgaaggcggctacaccatcaacgtgaccggt
ccaacgactgacacgctgacggcgaagaacgtcgtcgtcgccaccggctcgaacgcacgc
cagctgccgggcgcggaattcgacgagaagctgatcctgtcgaacaccggcgccctggcc
atcgatgcggttccatcgaagctgggcgtgatcggcgccggcgtcatcggcctggaaatg
ggttcggtatggcgccgcgtcggtgccgacgtcaccgtgctggaaggcctgccgaccttc
ctgggcgccgtcgacgagcagatcgccaaggaagcccacaagctgttcaccaagcagggc
ctgaaaatcaacctgggttgcaagatcggcgcgatcaccaagggcgagaataatgtcacg
gtgcagtacgccgattcgaccggcgccgagcagaccgcgaccttcgaccgcctgatcatc
tcgatcgggcgcgtgccgaacacgatcggcctgaacggcgaatccgtcggcctgcagctg
gacgagcgcggctttgtggtcgttgacgacgaatgccgcaccagcctgccgggcgtgtgg
gcagtcggcgacgtcgtgcgcggcccgatgctggcgcacaaagccgaggaagagggcgtt
gccgttgccgagcgcatcgccggccagcacggccacgtcaacttcaacacgattccatgg
gtgatctacacctcgccggaaatcgcgtgggtcggcaagaccgagcagcagctgaaggcc
gaaggcgtcgcgtacaaagccggcaccttcccgttcatggccaacggccgtgcgcgcgcg
ctgggcgatacctcgggcatggtgaaattcctggccgacgccaccaccgacgaaatcctg
ggcgtgcacatcgtgggcccggtcgcttcggaactgatctcggaagccgtcgtcgcgatg
gaattcaaggcctcgtcggaagacatcgcccgcatctgccacgcgcacccgtcgctgtcg
gaagccgtcaaggaagccgcgctggcggtcgacaagcgttcgctgaatttctag

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