Massilia litorea: LPB04_12650
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Entry
LPB04_12650 CDS
T09729
Symbol
lpdA
Name
(GenBank) dihydrolipoyl dehydrogenase
KO
K00382
dihydrolipoyl dehydrogenase [EC:
1.8.1.4
]
Organism
mlir
Massilia litorea
Pathway
mlir00010
Glycolysis / Gluconeogenesis
mlir00020
Citrate cycle (TCA cycle)
mlir00260
Glycine, serine and threonine metabolism
mlir00280
Valine, leucine and isoleucine degradation
mlir00310
Lysine degradation
mlir00380
Tryptophan metabolism
mlir00620
Pyruvate metabolism
mlir00630
Glyoxylate and dicarboxylate metabolism
mlir00640
Propanoate metabolism
mlir00670
One carbon pool by folate
mlir00785
Lipoic acid metabolism
mlir01100
Metabolic pathways
mlir01110
Biosynthesis of secondary metabolites
mlir01120
Microbial metabolism in diverse environments
mlir01200
Carbon metabolism
mlir01210
2-Oxocarboxylic acid metabolism
mlir01240
Biosynthesis of cofactors
Module
mlir_M00009
Citrate cycle (TCA cycle, Krebs cycle)
mlir_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
mlir_M00036
Leucine degradation, leucine => acetoacetate + acetyl-CoA
mlir_M00307
Pyruvate oxidation, pyruvate => acetyl-CoA
mlir_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
mlir00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
LPB04_12650 (lpdA)
00020 Citrate cycle (TCA cycle)
LPB04_12650 (lpdA)
00620 Pyruvate metabolism
LPB04_12650 (lpdA)
00630 Glyoxylate and dicarboxylate metabolism
LPB04_12650 (lpdA)
00640 Propanoate metabolism
LPB04_12650 (lpdA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
LPB04_12650 (lpdA)
00280 Valine, leucine and isoleucine degradation
LPB04_12650 (lpdA)
00310 Lysine degradation
LPB04_12650 (lpdA)
00380 Tryptophan metabolism
LPB04_12650 (lpdA)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
LPB04_12650 (lpdA)
00670 One carbon pool by folate
LPB04_12650 (lpdA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
mlir04147
]
LPB04_12650 (lpdA)
Enzymes [BR:
mlir01000
]
1. Oxidoreductases
1.8 Acting on a sulfur group of donors
1.8.1 With NAD+ or NADP+ as acceptor
1.8.1.4 dihydrolipoyl dehydrogenase
LPB04_12650 (lpdA)
Exosome [BR:
mlir04147
]
Exosomal proteins
Exosomal proteins of breast cancer cells
LPB04_12650 (lpdA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pyr_redox_2
Pyr_redox_dim
Pyr_redox
Pyr_redox_3
FAD_oxidored
FAD_binding_2
AlaDh_PNT_C
GIDA
HI0933_like
NAD_binding_8
FAD_binding_3
3HCDH_N
Amino_oxidase
DAO
Thi4
Motif
Other DBs
NCBI-ProteinID:
QOL47875
UniProt:
A0A7L9U104
LinkDB
All DBs
Position
2836990..2838423
Genome browser
AA seq
477 aa
AA seq
DB search
MSNEKQFDVVVIGGGPGGYIAAIRAAQLGFKTACIDEWSNAAGKPAPGGTCTNVGCIPSK
ALLQSSEHFEHAGHAFAEHGINVAGLELNLPQMLKRKDTIVKQNNDGILFLFKKNKVTFF
HGRGAFAGKAEGGYTINVTGPTTDTLTAKNVVVATGSNARQLPGAEFDEKLILSNTGALA
IDAVPSKLGVIGAGVIGLEMGSVWRRVGADVTVLEGLPTFLGAVDEQIAKEAHKLFTKQG
LKINLGCKIGAITKGENNVTVQYADSTGAEQTATFDRLIISIGRVPNTIGLNGESVGLQL
DERGFVVVDDECRTSLPGVWAVGDVVRGPMLAHKAEEEGVAVAERIAGQHGHVNFNTIPW
VIYTSPEIAWVGKTEQQLKAEGVAYKAGTFPFMANGRARALGDTSGMVKFLADATTDEIL
GVHIVGPVASELISEAVVAMEFKASSEDIARICHAHPSLSEAVKEAALAVDKRSLNF
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
atgagtaacgagaaacaattcgacgtcgtcgtcatcggcggcggccctggcggctatatc
gctgccatccgcgcagcccagctcggcttcaagacggcctgtatcgacgagtggagcaac
gcggcaggcaagccggctccaggcggcacctgcaccaacgtcggctgcatcccgtcgaaa
gcgctgctgcaatcgtcggaacacttcgagcacgccggccacgccttcgccgagcacggc
atcaatgtcgccggcctggaactgaacctgccgcaaatgctcaagcgcaaggacaccatc
gtcaagcagaacaacgacggcatcctgttcctgttcaagaagaacaaggtcaccttcttc
cacggccgcggcgccttcgccggcaaggccgaaggcggctacaccatcaacgtgaccggt
ccaacgactgacacgctgacggcgaagaacgtcgtcgtcgccaccggctcgaacgcacgc
cagctgccgggcgcggaattcgacgagaagctgatcctgtcgaacaccggcgccctggcc
atcgatgcggttccatcgaagctgggcgtgatcggcgccggcgtcatcggcctggaaatg
ggttcggtatggcgccgcgtcggtgccgacgtcaccgtgctggaaggcctgccgaccttc
ctgggcgccgtcgacgagcagatcgccaaggaagcccacaagctgttcaccaagcagggc
ctgaaaatcaacctgggttgcaagatcggcgcgatcaccaagggcgagaataatgtcacg
gtgcagtacgccgattcgaccggcgccgagcagaccgcgaccttcgaccgcctgatcatc
tcgatcgggcgcgtgccgaacacgatcggcctgaacggcgaatccgtcggcctgcagctg
gacgagcgcggctttgtggtcgttgacgacgaatgccgcaccagcctgccgggcgtgtgg
gcagtcggcgacgtcgtgcgcggcccgatgctggcgcacaaagccgaggaagagggcgtt
gccgttgccgagcgcatcgccggccagcacggccacgtcaacttcaacacgattccatgg
gtgatctacacctcgccggaaatcgcgtgggtcggcaagaccgagcagcagctgaaggcc
gaaggcgtcgcgtacaaagccggcaccttcccgttcatggccaacggccgtgcgcgcgcg
ctgggcgatacctcgggcatggtgaaattcctggccgacgccaccaccgacgaaatcctg
ggcgtgcacatcgtgggcccggtcgcttcggaactgatctcggaagccgtcgtcgcgatg
gaattcaaggcctcgtcggaagacatcgcccgcatctgccacgcgcacccgtcgctgtcg
gaagccgtcaaggaagccgcgctggcggtcgacaagcgttcgctgaatttctag
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