Massilia litorea: LPB04_13650
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Entry
LPB04_13650 CDS
T09729
Symbol
dapE
Name
(GenBank) succinyl-diaminopimelate desuccinylase
KO
K01439
succinyl-diaminopimelate desuccinylase [EC:
3.5.1.18
]
Organism
mlir
Massilia litorea
Pathway
mlir00300
Lysine biosynthesis
mlir01100
Metabolic pathways
mlir01120
Microbial metabolism in diverse environments
mlir01230
Biosynthesis of amino acids
Module
mlir_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
mlir00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
LPB04_13650 (dapE)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
mlir01002
]
LPB04_13650 (dapE)
Enzymes [BR:
mlir01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.18 succinyl-diaminopimelate desuccinylase
LPB04_13650 (dapE)
Peptidases and inhibitors [BR:
mlir01002
]
Metallo peptidases
Family M20
LPB04_13650 (dapE)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M20
M20_dimer
Peptidase_M28
Motif
Other DBs
NCBI-ProteinID:
QOL48056
UniProt:
A0A7L9U1U3
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Position
complement(3051090..3052244)
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AA seq
384 aa
AA seq
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MIRTSRTQALAAELIALDSITPHDKGCQQRLTELLAPLGFVCESIVSNGVTNLWARKGTE
SPVFVFAGHTDVVPTGPVQQWASEPFTPTVREGKLYGRGAADMKTSIAAMVVACEEFVAS
HPDHKGSIAFLITSDEEGPATDGTVVVCELLEERGVTLDYCLVGEPTSSHILGDMIKNGR
RGSLSGHLVIKGVQGHIAYPHLARNPIHQAAPALAELAAEVWDEGNEYYAPTSWQVSNIH
AGAGANNVIPGQLTLEFNFRFSTASTAEGLEARVHAILDHHGLEYDLEWTLSGLPFLTPK
GTLSDAVCGAIRAETGVATELSTTGGTSDGRFIARICPQVIEFGPPNASIHKIDEHVELR
FIDPLKNIYRRTLENLLTPGLLAA
NT seq
1155 nt
NT seq
+upstream
nt +downstream
nt
atgatcaggacctcgcgcacccaggcgctcgccgccgaactgatcgccctcgactcgatc
acgccgcacgacaagggttgccagcagcgcctgaccgagctgctcgcgccgctcggcttc
gtctgcgagagcatcgtctcgaacggcgtgacgaacctgtgggcgcgcaagggaaccgaa
tcgcccgtgttcgtgttcgccggccataccgacgtggtgccgaccgggccggtgcagcag
tgggcctcggagccgttcacgccgacggtgcgcgagggtaagctgtatggccgcggcgcg
gccgacatgaagacctcgattgcggcgatggtggtcgcctgcgaagagttcgtggcaagc
caccccgaccacaagggctcgattgccttcctgatcaccagcgacgaggaaggccccgcg
acggacggcaccgtggtggtctgcgagctgctggaagaacgcggcgtcacgctcgactac
tgcctggtcggcgagccgacctcctcccacatcctgggcgacatgatcaagaacggccgc
cgcggctcgctctcgggccatctcgtcatcaagggcgtgcagggccacatcgcctatccg
cacctggcgcgcaaccctatccaccaggccgcgcccgcgctggccgagctggccgccgag
gtctgggacgaaggcaacgaatactatgcgccgacttcctggcaggtctcgaacatccat
gccggcgccggcgccaacaacgtcattccgggccagctgacgctggaattcaacttccgc
ttctcgaccgcgagcacggccgagggcctggaagcgcgggtgcacgccatcctcgaccat
cacggcctcgagtacgacctggaatggaccctgtccggcctgcccttcctgaccccgaag
ggaacgctgtcggacgcggtatgcggcgcaatccgcgccgagacgggcgtggccaccgaa
ctgtcgaccacgggcgggacctcggatgggcgcttcatcgcccgcatctgtccccaggtg
atagaattcgggccaccaaacgccagcatccacaagatcgacgaacacgtcgagctgcgc
ttcatcgatccactgaagaacatctaccgccgcacgctggaaaatctgctcacccccggc
ctgctggccgcttaa
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