Massilia litorea: LPB04_13950
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Entry
LPB04_13950 CDS
T09729
Name
(GenBank) exonuclease SbcCD subunit D C-terminal domain-containing protein
KO
K03547
DNA repair protein SbcD/Mre11
Organism
mlir
Massilia litorea
Brite
KEGG Orthology (KO) [BR:
mlir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mlir03400
]
LPB04_13950
DNA repair and recombination proteins [BR:
mlir03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
LPB04_13950
Archaeal homologous recombinant proteins
LPB04_13950
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SbcD_C
Metallophos
Metallophos_2
SPDY
Motif
Other DBs
NCBI-ProteinID:
QOL48107
UniProt:
A0A7L9TZR2
LinkDB
All DBs
Position
complement(3115564..3116805)
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AA seq
413 aa
AA seq
DB search
MRLLHTSDWHLGQTLHNYDRTYEHQCFLDWLLDTIVEEEADALLIAGDIFDNANPSSAAQ
RQLYGFLQRAKARAPQLQIVVIAGNHDSPGRLEAPGPLLEAHGTVVIGNVVRGRDGAIDL
ERLIVPLHDKSGEVKAWCLGVPFLRPGDVPKAEVEGDAYLNGIALLYQQAFALAQSRREP
QQAILAMGHCHMVDGQSSTDSERRIVIGGTEALPASMFDPAIAYAALGHLHLAQRVGKKD
HLRYSGSPLPLSFAEVGYQHQVLRIDLDGPVAKQITPLLVPRAVELLRVPPKPAPLPEVL
AALEALDLDPDLPPQCRPYLEVRVLLDGPEPSLRAQVEAAIAGKPVRLAKIEPTRKTVTR
EIGADALTLDQLAQLQPDDIFRRLWQQRFGEEAPNEQLTAFAELMLPGDAERA
NT seq
1242 nt
NT seq
+upstream
nt +downstream
nt
atgcggctgttgcacacttccgactggcacctcggccagaccctgcacaattacgaccgg
acctacgaacaccagtgcttcctcgactggctgctcgacaccatcgtagaagaagaggcc
gacgcgctcctgatcgcgggcgacattttcgacaacgccaatccctcgtccgccgcccag
cgccagctgtacgggttcctgcagcgcgcgaaagcgcgcgcgccgcagctgcagatcgtc
gtcatcgccggcaaccacgattcgccaggccggctggaagcgccggggccgctgctggaa
gcccacggcacggtggtgatcggcaacgtggtgcgcggccgcgacggcgcgatcgacctc
gaacgcctgatcgtgccgctgcacgacaaatccggggaagtgaaggcctggtgcctgggc
gtgcctttcctgcgtccgggcgacgtgccgaaggcggaggtcgaaggcgacgcctacctg
aacggcatcgccctgctctaccagcaggctttcgcgctggcgcagtcgcgccgtgaaccg
cagcaggccatcctggccatgggccattgccacatggtcgacggccagtcctcgaccgac
tccgagcgccgcatcgtcatcggcggcaccgaggcgctgccggcctcgatgttcgatccc
gcgatcgcctacgcggccctcggccacctgcacctggcccagcgcgtcggcaagaaggac
catttgcgctattcgggcagcccgctgccgctgtccttcgccgaagtcggctaccagcac
caggtcttgcgcatcgacctcgacggcccggtggcgaagcagatcacgccgctgctggtg
ccgcgcgcggtcgagctgctgcgcgtgccgccgaaaccggcgccgctgccggaagtgctg
gccgccctggaggcgctcgacctcgaccccgacctgccgccgcaatgccggccctacctg
gaagtgcgggtgctgctcgacggtcccgagccgagcctgcgcgcccaggtggaggcggcc
attgccggcaagccggtgcggctggcgaagatcgaaccgacccgcaagacggtcacccgc
gagattggtgccgacgccctgacgctcgaccagctggcccagctgcagccggacgacatc
ttccgccgcctgtggcagcagcgcttcggcgaagaggcaccgaacgaacagttgacggcc
tttgccgaactgatgctccccggcgacgcggagcgcgcatga
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