Massilia litorea: LPB04_15155
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Entry
LPB04_15155 CDS
T09729
Symbol
recC
Name
(GenBank) exodeoxyribonuclease V subunit gamma
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
mlir
Massilia litorea
Pathway
mlir03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mlir00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
LPB04_15155 (recC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mlir03400
]
LPB04_15155 (recC)
Enzymes [BR:
mlir01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
LPB04_15155 (recC)
DNA repair and recombination proteins [BR:
mlir03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
LPB04_15155 (recC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
PAS_4
Motif
Other DBs
NCBI-ProteinID:
QOL48313
UniProt:
A0A7L9TZU6
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All DBs
Position
3368853..3372248
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AA seq
1131 aa
AA seq
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MSSTITPGLLILHGNQMEMLREAVFDWLRGHPLGPLEQETILVQSNGFAEWLKIALAEEL
GVCAATRVALPARFLWEAYRAMLGRDRVPSRSPFDRDPLTWRLMRLLPTLLQEPVFAPLA
HFLGDGCPERRLQLAERLADLFDQYQVYRADWLTDWEIGRDQLRRAGGDPVPLAPDQRWQ
ARLWRAVHESVPPMQRGTGRAMIHEIFVAKILAGEPPSGRLPRRVVLFGMSALPYQTLQA
IAALSHHTQVLLAVPNPCQFYWGDIIEGRELLRAAHKRQPAREGVDLATLPIEELHAHSH
PLLASWGRQGRDFVRMLDEFDNEAGRPETEGIAKLRVDLFSEGDGETLLQQVQAAVRDLR
PLNEHPHVPPPREDRSIEFHVTHSTQREVEVLHDQLLSWFEADPTLRPRDIVVMVPDIDT
FSAAIHAVFDQHKRSDPRHIPFEIGDTRDRSVNPLLVALEWLLRLPQQRCRQSEIRDLLD
VPAVATRFGVREDDLHTLGAWIDGAGVRWGLDGEHRAGLGLGAAGEQNAWIFGVRRMLLG
YASGAGARFGDIEPYAEVGGLDAALAGSLAQFVECLLEWRARLAQARTPAEWGVQARALL
AAFFDGREENDRITLAQLGEALNCWLEMTEAGGFDEAVPLAVLREAWLGQIDQPTLNHQF
VSGGVTFCTLMPMRAVPFRAVCLLGMNDGDFPRRTPQNDFDLLAMPGMSRPGDRSRRDDD
RYLMLEALLAARDKLYVSWVGRNVRDNSEQPASVLVAQLRDYLHAGWDLDLHSLTVEHAL
QPFSRRYFEEGGLLTYAREWRAAHGSEGGEALDTLPAYELEPDFRLKLSELASFLKQPAR
YFFRRRLGVIFNAAEVIGEDEEPFSLDALDRYFLEDSLLDDSGTVEEPDEVRQVLTNRAE
RLAREGVLPIGLVGRQWQQQLVEGLVPVRRAWLELGRRFPQPAPKLAVSLDLDGVLLEDW
IDRLRSDGERTAWLMQISSNVLDKSGAPRGDKLIDAWLRQLAASAAGAAVTGYLVARDAT
ITMAPIEREMALAALGDISALWRHNLNAPLPVACRTALAHLADGKPRLVYDGDYEFPGEV
EREPCLARLWPEFSLLVAAGGWPDLAEALYGGLVAWLANHIQVTQHGGDAQ
NT seq
3396 nt
NT seq
+upstream
nt +downstream
nt
atgtcctccacgatcacccccggcctgctgattttgcacggcaaccagatggaaatgctg
cgcgaagccgtcttcgactggctgcgcgggcatccgctcgggccgctggagcaggaaacc
atcctggtgcagtcgaacggctttgccgaatggctgaaaatcgcgctggccgaggagctc
ggggtgtgcgcggccacgcgcgtggccctgccggcgcgctttctgtgggaagcctaccgc
gccatgctcgggcgcgaccgggtgccgagccgttctcccttcgaccgcgacccgctgacc
tggcgcctgatgcgcctgctgccgacgctgttgcaggagccggtgttcgcgccgctcgcg
cacttcctgggcgacggctgtcccgagcgccgcctgcagctggccgagcgcctggccgat
ttattcgaccagtaccaggtgtaccgcgccgactggctgaccgactgggagatcggccgc
gaccagctgcgccgtgccggcggcgacccggtacccctcgctcccgaccagcgctggcag
gcgcgcttgtggcgcgccgtgcacgagagcgtgccgccgatgcagcgcggaaccgggcgc
gccatgatccacgaaatcttcgtcgccaaaatcctggccggcgagccgccgtccggccgc
ctgccgcgccgcgtggtgctgttcgggatgtcggccctgccataccagaccctgcaggcg
atcgccgcgctctcgcaccacacgcaggtgctgctggccgtgccgaacccctgccagttc
tactggggcgacatcatcgaagggcgcgagttattgagggccgcgcacaagcgccagccg
gcgcgcgaaggcgtcgacctggccacgctgccgatcgaagaactgcacgcgcacagccat
ccgctgctggcaagctggggacgccaggggcgcgatttcgtgcgcatgctcgacgaattc
gacaacgaagccggacgccccgaaaccgaggggatcgccaaactgcgggtcgacctgttc
tccgaaggcgacggcgagaccctgctgcagcaggtgcaggccgcggtgcgggacctgcgt
ccgctgaacgaacacccgcacgtgccgccgccgcgcgaggaccgctcgatcgagttccac
gtgacccacagcacccagcgcgaagtcgaggtgctgcacgaccagctgctgtcctggttc
gaggccgacccgacgctgcgcccgcgcgacatcgtcgtcatggtgcccgacatcgacacc
ttctcggccgcgatccacgccgtcttcgaccagcacaagagaagcgacccgcgccacatc
cccttcgagatcggcgatacgcgcgaccgcagcgtgaatcctctgctggtggcgctggag
tggctgctgcgcctgccgcagcagcgctgccgccagagcgaaatccgcgacctgctcgac
gtgccggcggtggcgacgcggttcggcgtcagggaagacgacctgcacacgctgggcgcc
tggatcgacggcgccggcgtgcgctggggcctggacggcgaacaccgcgcgggcctcggg
ctcggtgcggcgggcgaacagaatgcctggatcttcggcgtacggcgcatgctgctcggt
tacgccagcggcgccggcgcgcgcttcggcgacatcgaaccctacgcggaagtgggcggg
ctcgatgcggcgctggccggttcgctggcccagttcgtggaatgcctgctggagtggcgc
gcgcgcctggcgcaggcgcgcaccccggccgagtggggcgtgcaggcgcgcgccttgctg
gccgccttcttcgacggccgcgaggagaacgaccgcatcaccctggcccagctcggcgag
gcgctgaactgctggctggagatgacggaggcgggcggcttcgacgaagcggtaccgctg
gccgtgctgcgcgaagcctggctcggccagatcgaccagccgaccctgaatcaccagttc
gtctcgggcggcgtcaccttctgcaccctgatgccgatgcgcgccgtgcccttccgggcg
gtctgcctgctcggcatgaacgacggcgacttcccacgccgcacgccgcagaacgatttc
gacctgctggccatgccgggcatgagccgccccggcgaccgttcgcgccgcgacgacgac
cgctacctgatgctggaggccctgctggctgcgcgcgacaagctgtacgtgagctgggtc
gggcgcaacgtgcgcgacaacagcgagcagccggcctcggtgctggtggcgcagctgcgc
gactacctgcatgcaggctgggacctcgacctgcacagcctgacggtggaacacgcgctg
cagcccttcagccgccgctatttcgaggagggcgggctgctgacctatgcgcgcgaatgg
cgcgcagcgcatggttcggagggcggcgaggcgctcgataccttgccggcttatgaactg
gaaccggatttccgcctgaagctgtccgaactggcgagctttctgaaacagccggcgcgc
tacttcttccggcgccggctgggcgtgatcttcaacgcggccgaggtgatcggcgaggac
gaggaaccgttctcgctcgacgcgctcgaccgctacttcctggaagacagcctgctcgac
gattcgggcacggtcgaggaacccgacgaagtgcgccaggtgctgacgaatcgcgccgaa
cggctggcgcgcgaaggcgtgctgccgatcggcctggtcgggcgccagtggcagcagcag
ctggtcgagggcctggtgccggtgcggcgcgcctggctggagctcgggcggcgcttcccg
cagccggcgcccaagctggcggtcagcctcgatctcgacggcgtgctgctggaagactgg
atcgaccgcctgcgcagtgacggcgaacgcactgcctggctgatgcagatatcctcgaac
gtgctggataaatccggcgcgccgcgcggcgacaagctgatcgacgcctggctgcgtcag
ctggccgccagcgccgccggtgcggcggtgaccggctacctggtcgcgcgcgacgcaacc
atcacgatggcgccgatcgagcgcgagatggcgctggccgcgcttggcgacatcagcgcg
ctgtggcggcacaatctgaacgcaccgctgcctgtggcctgcaggacggcactggcgcac
ctggcagacggcaagccgcgcctggtctacgacggcgactacgaattcccgggcgaggtc
gaacgggagccatgcctggcgcgcctgtggccggaattcagtctgctggtcgcggccggc
ggctggccggacctggccgaggccctgtacggcggcctcgtggcctggctcgccaaccat
atccaggtgacgcagcatgggggagacgcgcaatga
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