Massilia litorea: LPB04_20285
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Entry
LPB04_20285 CDS
T09729
Name
(GenBank) L,D-transpeptidase family protein
KO
K21470
L,D-transpeptidase YcbB
Organism
mlir
Massilia litorea
Brite
KEGG Orthology (KO) [BR:
mlir00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
mlir01002
]
LPB04_20285
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
mlir01011
]
LPB04_20285
Peptidases and inhibitors [BR:
mlir01002
]
Cysteine peptidases
Family C82
LPB04_20285
Peptidoglycan biosynthesis and degradation proteins [BR:
mlir01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
LPB04_20285
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Scaffold
YkuD
PG_binding_1
Motif
Other DBs
NCBI-ProteinID:
QOL49225
UniProt:
A0A7L9U509
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All DBs
Position
complement(4535819..4537540)
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AA seq
573 aa
AA seq
DB search
MGESHRAQRCSHRKPPFFAWFTTAESVSQAPKFESIMKLTQTIRAALALCAIAALAPASG
LAQPAPAAIHALTVQASQSPSLPAGPYDERGWLDRFYAPRNYAPAWNASTAAAALWVLRR
AALQGLNPADYGADSLQRQLRSGEADTARFDVALTSAMLHYLADLRVGRVRSEYHSRAPD
PRLRQYDPVERLRTGLAAGKLQAAVQAAEPQIWQYGRVKAALAQYRELAGQAYPALPRPD
AKVLPGGAYPAVKALYARLVLLGDLAADAPPPPEGIYSDPVEEGVRHFQARHGLDEDGVL
GRGTIDALNVPPAQRVRQFELTLERLRWLPDFGPGPLIVVDLPAYRLWALNKGSTEAPLE
MRVVIGSAVKTETPLFVGQMRYVEFNPYWNVPRSILEKEMLPKLERNAAYLTQNDMETVP
PGASAADLRAGRARVRQRPGPKNALGAIKFALPNPMDIYLHSTPARELFQRSRRDLSHGC
IRVEHPAALAQFVLSQQRQWNADTIQDALQAGPTRHVDLVHAIPVVIFYATASVDSEGMP
RFARDVYGRDRKLEQDLRARYGQMAPAEGRSPE
NT seq
1722 nt
NT seq
+upstream
nt +downstream
nt
gtgggcgaatcccaccgtgcacagcgctgcagtcaccgcaagccgccttttttcgcctgg
ttcaccaccgccgaatcggtcagccaggccccaaagttcgaaagtatcatgaagctcacc
cagacaatccgcgctgcgctcgcgctttgtgcgattgcagcgctcgcccccgccagcggc
ctcgcgcagccggctcccgccgcaatccatgccttgacggtccaggcttcgcagtctccg
tcgctgcctgcgggtccctacgacgaacgtggctggctcgatcggttctacgccccccgc
aactatgcgccagcctggaatgcgtcgaccgccgcggcggccttgtgggtgctgcgccgg
gccgcgctgcagggcttgaacccggccgactacggcgcggactccctgcagcggcagctg
cgctcgggcgaagccgataccgcccgcttcgacgtcgcgctgacctcggccatgctccat
tacctggccgacctgcgcgtcggccgcgtgcgctccgaatatcacagccgcgcacccgat
ccgcggctgaggcaatacgacccggtcgagcgcctgcgtaccgggctcgccgccggcaag
ctgcaggctgcggtgcaggcggccgagccgcaaatctggcagtacggacgggtcaaggcg
gccctggcgcagtaccgcgagctggcggggcaggcttatccggcgctaccgcgaccggat
gcgaaggtcctgcccggcggggcttatccggccgtgaaggcgctgtatgcgcgcctggtc
ttgttgggcgacctggcggccgatgcgccgccaccgcccgagggaatctacagcgacccg
gtcgaagagggcgtccggcacttccaggcccgtcacggcctggatgaagacggcgtgctc
ggccgcggcacgatcgacgcgctgaatgtccccccggcccagcgcgtgcgccagttcgaa
ctgacgctcgagcgcctgcgctggctacccgacttcggccctggcccgctgatcgtggtc
gacctgccggcttaccgcttgtgggccctgaacaagggcagcaccgaggcgccgctcgag
atgcgcgtcgtgattggctccgcggtcaagaccgaaaccccgctcttcgtcggccagatg
cgttatgtcgagttcaacccttactggaacgtcccgcgcagcattctcgaaaaggaaatg
ctgcccaagctcgagcgcaacgctgcctacctcacgcagaacgacatggagacggtgccg
ccaggcgccagcgcggccgatctccgggccggccgggcgcgcgtccgccagcgccctggg
ccgaaaaatgcactgggggcgatcaagttcgcgctgcctaatccaatggacatttacctg
cactcgaccccggcccgcgagttgttccagcgcagccggcgcgacctgtcgcacggctgc
atccgggtcgagcatccggccgctctggcccagttcgtgctcagccagcagcggcaatgg
aatgccgatacgatccaggacgcgctgcaggcggggccgacccggcacgtcgacctggtc
cacgcgattcccgtcgtgattttctacgctactgccagcgtcgacagtgaagggatgccg
cgctttgccagggatgtctacggccgcgaccgcaagctcgagcaggacttgcgggcacgc
tacggacagatggcccctgcggaaggccgatctccggaataa
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