Massilia litorea: LPB04_20885
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Entry
LPB04_20885 CDS
T09729
Symbol
serS
Name
(GenBank) serine--tRNA ligase
KO
K01875
seryl-tRNA synthetase [EC:
6.1.1.11
]
Organism
mlir
Massilia litorea
Pathway
mlir00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
mlir00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
LPB04_20885 (serS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
mlir01007
]
LPB04_20885 (serS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mlir03016
]
LPB04_20885 (serS)
Enzymes [BR:
mlir01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.11 serine---tRNA ligase
LPB04_20885 (serS)
Amino acid related enzymes [BR:
mlir01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
LPB04_20885 (serS)
Transfer RNA biogenesis [BR:
mlir03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
LPB04_20885 (serS)
Prokaryotic type
LPB04_20885 (serS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2b
Seryl_tRNA_N
Motif
Other DBs
NCBI-ProteinID:
QOL49327
UniProt:
A0A7L9U311
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All DBs
Position
complement(4654028..4655323)
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AA seq
431 aa
AA seq
DB search
MIDIQLLRKDIDTVAARLAARKFQLDVAGFNAIEAERKAIQTRTEELQGKRNSLSKQIGM
LKGKGEDTSSVMAEVAGLGDELKANEGLLADVQRKMAEFMEAIPNLPHESVPAGTDETGN
VEVRKIGTPPSFDFEVKDHVDIGEKLGLDFDTATKLTGSRFSVMKGGIARLHRALAQYML
DTHTDKHGYLECYTPYMVNADSLRGTGQLPKFEEDLFSVKKGGAEGEGETFYLIPTSEVT
LTNVVRDEIVPLDALPMKMTAHTPCFRSEAGSYGRDTRGMIRQHQFDKVEMVQIAHPEQS
HAALDEMVGHAEFILQSLGLPYRVMLLCTGDMGFGAAKTYDLEVWLPAQNTYREISSLSN
MEAFQARRMGARFRNAQNKPELLHTLNGSGLAVGRTLVAVLENYQQADGSVVIPEVLRPY
MGGLERLAPAA
NT seq
1296 nt
NT seq
+upstream
nt +downstream
nt
atgatagacatccaacttctccgcaaagacatcgacaccgtcgccgcgcgcctggctgcg
cgcaagttccagctcgacgtggccggcttcaacgccatcgaggccgagcgcaaggcgatc
cagacccgcaccgaagaactgcagggcaagcgcaattcgctgtccaagcagatcggtatg
ttgaagggcaagggcgaggacacctccagcgtgatggcggaagtagcgggcctgggggat
gaactcaaagccaacgaagggctgctggccgacgtccagcgcaagatggccgagttcatg
gaggcgatcccgaacctgccgcacgaatcggtgccggccggcactgacgaaaccggcaac
gtcgaagtgcgcaagatcggcacgccgccgtcgttcgacttcgaagtgaaggaccacgtc
gacatcggcgaaaagctgggcctggacttcgacaccgcgaccaagctgaccggctcgcgc
ttctcggtgatgaagggcggcatcgcgcgcctgcaccgcgcgctggcccagtacatgctc
gatacccataccgacaagcatggctaccttgaatgctacaccccgtacatggtcaatgcc
gactcgctgcgcggcaccggccagctgccgaagttcgaagaagacctgttctcggtgaag
aagggcggcgcggaaggcgagggcgagaccttctacctgatcccgacctcggaagtgacg
ctgaccaacgtcgtgcgcgacgagatcgtcccgctcgacgcgctgcccatgaagatgacg
gcgcacaccccgtgcttccgttcggaggccggcagctacggccgcgacacccgcggcatg
atccgccagcaccagttcgacaaggtcgagatggtgcagatcgcccatccggaacagtcg
catgccgcgctggacgagatggtcggccatgccgagttcatcctgcagagcctgggcctg
ccgtatcgcgtgatgctgctgtgcaccggcgacatgggctttggcgcggccaagacctat
gacctggaagtgtggctgccggcgcagaacacctatcgcgagatttcctcgctgtcgaac
atggaagccttccaggcccgccgcatgggcgcccgtttccgcaacgcccagaacaagccg
gaactgctgcacacgctgaacggctcgggcctggcagtggggcgcacgctggtcgcggtg
ctggagaactaccagcaggccgatggcagcgtggtgattccggaagtgctgcgtccgtac
atgggcgggctggagcgtctggcgccggctgcctga
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