Massilia litorea: LPB04_21530
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Entry
LPB04_21530 CDS
T09729
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
mlir
Massilia litorea
Pathway
mlir03030
DNA replication
mlir03430
Mismatch repair
mlir03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mlir00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LPB04_21530
03430 Mismatch repair
LPB04_21530
03440 Homologous recombination
LPB04_21530
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mlir03032
]
LPB04_21530
03400 DNA repair and recombination proteins [BR:
mlir03400
]
LPB04_21530
Enzymes [BR:
mlir01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LPB04_21530
DNA replication proteins [BR:
mlir03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
LPB04_21530
DNA repair and recombination proteins [BR:
mlir03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
LPB04_21530
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNAX_ATPase_lid
DNA_pol3_gamma3
AAA
RuvB_N
AAA_16
AAA_22
AAA_14
AAA_18
AAA_2
AAA_30
DNA_pol3_tau_5
AAA_24
AAA_19
nSTAND3
Glyco_tranf_2_5
TsaE
Rad17
AAA_28
Mg_chelatase
AAA_assoc_2
Herpes_Helicase
Motif
Other DBs
NCBI-ProteinID:
QOL49442
UniProt:
A0A7L9U576
LinkDB
All DBs
Position
complement(4787302..4789449)
Genome browser
AA seq
715 aa
AA seq
DB search
MSYQVLARKYRPKNFETLVGQEHVVRALTHALDTGRLHHAYLFTGTRGVGKTTLSRILAK
SLNCTGPDGTGGITAQPCGVCEACRAIDAGRFVDYIEMDAASNRGVDEMAQLLEQAVYAP
SNARFKVYMIDEVHMLTNHAFNSMLKTLEEPPEHVKFILATTDPQKIPVTVLSRCLQFNL
KQMPPGHIVGHLENILGQEGVNFEQPALRLLAQGAHGSMRDALSLTDQAIAYAAGAVTLE
AVQGMLGALDQSYLVRLLDALANENGADLLAVADEMASRSLSYNGALQDLGTLLHRIALA
QSVPAAVPQDLPELADILRLAEAFDPQEVQLFYQIAVHGRNEIGLAPDEYAGFTMTLLRM
LAFRPGQGGAERIAAPAAAAAPRAAAPAARAASAAGASPAAAAATAATPAAAPQRPAAPA
SPAPANPAPAMNSARAAINAALEAARAASGQRAPAKRPGADAAPAAPSAPAATARPINVA
PAGGQPGAGPAPSAPAAQATRPAAPPPPWAGAQPQQPQAIARPQAQGQQQAERDDDGPPS
WVTEFSDDTAVANEAAAVAAPVSAPASSRAPAKAPHEYVVTPVPALDWDGNWPALAATLP
LRGVSQQLALQTELIDCHADAGSALFRLRVPVDTLRASGNSEKLQAALQEIFAGKRITVE
TEIGPVWYTASAEAKAAREERQRLAEAIVAGDPFVQEMERVLGAFVVPGSVRPPV
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
atgtcctatcaagtcctcgcccgcaaataccgccccaagaacttcgaaacgctggtcggc
caggagcacgtcgtgcgcgcgctcacccatgcgctcgacacgggccgcctgcaccacgcc
tacctgttcacgggcacccgcggcgtcggcaagacgacgctctcgcgtatccttgccaag
tcgctcaactgcaccggccctgacggcacgggcggcatcacggcccagccttgcggagtg
tgcgaagcctgccgcgcgatcgacgccggccgcttcgtcgactatatagagatggacgcc
gcctccaaccgcggcgtcgacgagatggcccagctgctcgagcaggccgtctacgcaccg
agcaatgcacgcttcaaggtctacatgatcgacgaggtgcacatgctgaccaatcacgcg
ttcaactcgatgctgaaaacgctcgaggaaccgcccgagcacgtcaagttcatcctcgcc
accaccgacccgcaaaagatcccggtcacggtgctgtcgcgctgcctgcagttcaacctg
aagcagatgccgccgggccacatcgtcggccacctggaaaacattttgggccaggaaggc
gtgaacttcgaacagccggcgctgcgcctgctggcgcaaggcgcgcacggctcgatgcgc
gatgcgctctcgctgaccgaccaggcgattgcctatgccgccggcgccgtgacgctggaa
gccgtgcagggcatgctcggcgcgctcgaccagtcctacctggtgcgcctgctcgatgcc
ctggcgaacgagaacggcgccgacctgctggccgtggccgacgagatggccagccgcagc
ctgtcgtacaacggtgcgctgcaggacctcggcaccttgctgcaccggatcgcgctggcg
cagtcggtgccggccgcggtgccgcaggatttgcccgaactcgccgacatcctgcgcctg
gccgaggccttcgatccgcaggaagtgcagctgttctaccagatcgccgtgcacggccgg
aacgaaatcggcctcgcgccggacgagtacgccggtttcaccatgaccctgctgcgcatg
ctggccttccggccggggcagggcggggccgagcgcattgctgcgccggctgccgcggcc
gcgccacgggcggcggcaccggcggcgcgtgccgcgtcggcggctggtgccagcccggcc
gctgcggcagccaccgcagccaccccggccgcagcgcctcagcgtccggctgcaccagcc
agcccggcgccggccaatccggcacccgccatgaattcggcgcgcgccgcgatcaatgcc
gcgctggaagcggcccgtgccgcctccggccagcgtgcgccggccaagcgcccgggcgcc
gatgcagcacctgcggcgccttcggctccggcagcaacggcgcgtccgatcaacgtcgct
cctgccggcggccagcctggcgccggcccggcgccgtccgcgccggcggcgcaggccacg
cgtccggctgcaccgcccccgccgtgggctggagctcagccgcagcagccgcaggctatt
gcccgtccgcaggcacagggccagcagcaggccgagcgcgacgacgatggaccgccatcc
tgggtcaccgaattttccgacgacaccgccgtcgccaacgaagccgctgccgtcgctgca
ccggtcagcgcgccggcaagcagccgcgcgccagccaaagcaccgcacgaatacgtggtc
acgccggtgccggcgctcgactgggacggtaactggccggcgctggccgccacgctgccg
ctgcgcggcgtgtcgcagcagctggccctgcagaccgaactgatcgactgccatgccgat
gcgggttcggccctgttccgcctgcgcgtgccggtcgacaccctgcgcgccagcggcaac
agcgaaaagctgcaggcggccttgcaggagatttttgccggcaagcgcatcacggtcgag
accgagatcggtccggtctggtacacggccagcgccgaagccaaggccgcgcgcgaagaa
cgccagcgcctggccgaagccatcgtcgccggcgatcccttcgtgcaggagatggaacgc
gtgctgggcgcctttgtcgtgcccggctcggtgcgtccgccggtctga
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