Massilia litorea: LPB04_21655
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Entry
LPB04_21655 CDS
T09729
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
mlir
Massilia litorea
Pathway
mlir00260
Glycine, serine and threonine metabolism
mlir00460
Cyanoamino acid metabolism
mlir00630
Glyoxylate and dicarboxylate metabolism
mlir00670
One carbon pool by folate
mlir00680
Methane metabolism
mlir01100
Metabolic pathways
mlir01110
Biosynthesis of secondary metabolites
mlir01120
Microbial metabolism in diverse environments
mlir01200
Carbon metabolism
mlir01230
Biosynthesis of amino acids
mlir01240
Biosynthesis of cofactors
mlir04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
mlir00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
LPB04_21655
09102 Energy metabolism
00680 Methane metabolism
LPB04_21655
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
LPB04_21655
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
LPB04_21655
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
LPB04_21655
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
LPB04_21655
Enzymes [BR:
mlir01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
LPB04_21655
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Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
Cys_Met_Meta_PP
Aminotran_5
Met_gamma_lyase
Motif
Other DBs
NCBI-ProteinID:
QOL49463
UniProt:
A0A7L9U315
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All DBs
Position
complement(4816507..4817754)
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AA seq
415 aa
AA seq
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MFAKDYTLAKVDPELWAAIQKENTRQQDHIELIASENYTSPAVMEAQGSQLTNKYAEGYP
GKRYYGGCEYVDVAEQLAIDRVKQLFGAEAANVQPNSGSQANQGVFFAMLKPGDTIMGMS
LAEGGHLTHGMALNMSGKWFNVISYGLTEQEDIDYEQMERLAREHKPKLIIAGASAFALR
IDFERFAKIAKEVGAYFMVDMAHYAGLIAAGEYPNPVPYADFVTSTTHKSLRGPRGGIIL
MKAEFEKQINSAIFPGIQGGPLMHVIAGKAVAFQEALQPEFKAYQQQVVKNAKALADALI
ARGLRIVSGRTESHVMLVDLRSKGLTGKEAEAILGQAHMTCNKNGIPNDPQKPFVTSGIR
LGSPAFTTRGFKEEDATKVGHLIADVLDNPHDAATIERVKAEVKVLTDKYPVYAK
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atgtttgcaaaagattacacgctggccaaggttgacccggaactgtgggctgccatccag
aaggaaaacacccgtcagcaggatcacatcgagctgatcgcgtccgagaactacacctcg
ccggccgtcatggaagcgcagggttcccagctcacgaacaagtatgccgaaggctatccg
ggcaagcgctactacggcggctgcgaatacgtcgacgtcgccgagcagctggcgatcgac
cgtgtcaagcaactgttcggcgcggaagccgccaacgtccagccgaactcgggctcgcag
gccaaccagggcgtgttcttcgccatgctgaagccgggcgataccatcatgggcatgtcg
ctggccgaaggcggccacctgacccacggcatggcgctgaacatgtccggtaaatggttc
aacgttatttcctacggtctgaccgagcaggaagacatcgactacgagcaaatggaacgc
ctggcgcgcgagcacaagccgaagctgatcatcgccggcgcttcggcgtttgcgctgcgc
atcgacttcgagcgcttcgcgaagatcgccaaggaagtcggcgcgtatttcatggtcgac
atggcccactacgccggcctgatcgccgccggcgaatacccgaatccggtcccatacgcc
gacttcgtcacctcgaccacgcataaatcgctgcgcggtccgcgcggcggcatcatcctg
atgaaggccgagttcgaaaagcagatcaattccgcgatcttccccggcatccagggcggc
ccgctgatgcacgtgatcgccggcaaggccgtcgccttccaggaagcgctgcagccggaa
ttcaaggcttaccagcagcaagtcgtgaagaacgccaaggccctggccgacgcgctgatc
gcacgcggcctgcgcatcgtctcgggccgtaccgagtcgcacgtgatgctggtcgacctg
cgttcgaaaggcctcaccggcaaggaagcggaagccatcctcggccaggcccacatgacc
tgcaacaagaacggcatcccgaacgacccgcagaagccgttcgtgacctcgggcatccgc
ctcggcagcccggccttcacgacgcgcggcttcaaggaagaagacgcgacgaaagtcggc
cacctgatcgccgacgtgctggacaatccgcacgacgccgcgaccatcgagcgcgtcaag
gcggaagtgaaagtgctgaccgacaagtacccggtgtacgccaagtaa
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