Massilia litorea: LPB04_22320
Help
Entry
LPB04_22320 CDS
T09729
Name
(GenBank) exodeoxyribonuclease VII large subunit
KO
K03601
exodeoxyribonuclease VII large subunit [EC:
3.1.11.6
]
Organism
mlir
Massilia litorea
Pathway
mlir03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mlir00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
LPB04_22320
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mlir03400
]
LPB04_22320
Enzymes [BR:
mlir01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
LPB04_22320
DNA repair and recombination proteins [BR:
mlir03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
LPB04_22320
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_L
tRNA_anti_2
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
QOL49580
UniProt:
A0A7L9U3X5
LinkDB
All DBs
Position
4974689..4976050
Genome browser
AA seq
453 aa
AA seq
DB search
MLNNPDSDTTYAAPPVLTVSALNAQVARLLERSFPLTWIGGEISNFTRASSGHWYFTLKD
DAAQVRAVMFRGRAQYAGFVPREGDKVEVRALVTLYGARGDYQINVEAIRRAGVGQLYEA
FLRLKEKLSSQGLFDQDRKRALPLFTRSIGIVTSPQAAALRDILTALKRRAPHVNIVLYP
APVQGQGAAGKIAEAIMTASERAEVDVLLVCRGGGSIEDLWSFNEEVVARAIASCSMPVI
AGVGHETDVTIADFAADMRAATPTAAAELAATPRDDWMGSLAADATDLRRAMRRQLSEAN
QGLDNLSRRLLSPTAQIAHQRLKLRAMASSLTHVVRAPLNRGGVLLAQLQQRWARHRPDV
RSLRAQLISEGRHLNASLCSAVKQRRDALEALSAQLELLNPQRTLERGYAIVSNAEGQAL
RSPGQIKARQVLTVRLAEGSAEVKVSSVQNRLE
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atgctgaacaatccagattccgacaccacctacgccgccccgcccgtcctcaccgtcagc
gccctgaatgcgcaggtggcgcgcctgctcgagcgttcctttcccctgacctggatcggc
ggcgaaatctcgaacttcacgcgtgccagttccggccactggtatttcacgctgaaggac
gacgcggcccaggtgcgcgcggtgatgttccgcggccgcgcccagtacgccggcttcgtg
ccgcgcgaaggcgacaaggtcgaggtgcgcgccctggtcaccctgtacggcgcgcgcggc
gactaccagatcaatgtcgaggcgatccgccgcgccggcgtgggccagttgtatgaagcc
ttcctgcgcctgaaggaaaagctcagcagccagggcctgttcgaccaggaccgcaagcgc
gccctgcccttgtttacgcgcagcatcggtatcgtcaccagcccgcaggcagcggccctg
cgcgacatcctgaccgccctgaaacgccgggcgccgcatgtgaacatcgtgctctacccg
gcgccggtgcaaggccagggcgcggccggcaaaattgccgaggcgatcatgactgcatcg
gagcgggcggaagtcgacgtgctgctggtctgccgcggcggcggctcgatcgaggacctg
tggagtttcaacgaggaagtcgtggcgcgcgcgatcgcgtcctgcagcatgcccgtcatt
gccggcgtcggccacgagaccgacgtcaccattgccgacttcgccgccgacatgcgcgcg
gccaccccgaccgccgccgcggaactggcggccacgccgcgcgacgactggatgggctcg
ctggcggccgacgccaccgacctgcgccgcgcgatgcggcgccagctgtcggaagcgaac
cagggcctcgacaacctcagccgccgcctgctcagcccgaccgcccagattgcccaccag
cgcctgaaactgcgcgccatggcgtccagcctgacccacgtggtacgcgcgccgctgaac
cgcggcggcgtgctgctggcgcagctccagcagcgctgggcccgccaccgtccggatgtg
cgctcgctgcgtgcccagctcatttccgagggccgccatctgaacgcaagcctgtgcagc
gcggtcaaacagcggcgcgacgccctcgaggccctgtccgcccagctggaactgctcaat
ccgcagcgcacgctcgagcgcggctatgcgatcgtcagcaatgccgagggccaggcactg
cgctcgcccggccagatcaaggcgcgccaggtgctgaccgtgcgcctggccgaaggcagc
gcggaagtgaaggtgtcgagcgtgcaaaaccggctggaatga
DBGET
integrated database retrieval system
