Metabacillus litoralis: KDJ21_003620
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Entry
KDJ21_003620 CDS
T08411
Symbol
sigB
Name
(GenBank) RNA polymerase sigma factor SigB
KO
K03090
RNA polymerase sigma-B factor
Organism
mlit
Metabacillus litoralis
Brite
KEGG Orthology (KO) [BR:
mlit00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mlit03021
]
KDJ21_003620 (sigB)
Transcription machinery [BR:
mlit03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
KDJ21_003620 (sigB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r4
Sigma70_r2
Sigma70_r4_2
GerE
IF2_N
KORA
DUF1492
HTH_3
HTH_23
NirdL-like_HTH
DUF134
NRBF2_MIT
Motif
Other DBs
NCBI-ProteinID:
UHA60806
LinkDB
All DBs
Position
complement(728279..729070)
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AA seq
263 aa
AA seq
DB search
MAQPSQNMKLTKEEVNELILDFQKTESKVAQLALVEHYTGLVETLAKKYSKGKSFHEDLR
QVGMIGLLGAIRRYDPTIGKPFEAFAIPTIIGEIKRFLRDKTWSVHVPRRIKELGPKIKA
AVDKLTNENQRSPQVREIAEYLDVTEEEVLETMEMGKSYQALSVDHSIEADSDGSTVTIL
DIVGSQEQGYEKVNQKLMLQSVLHVLSDREKEIIECTFILNKSQKETGEQLGISQMHVSR
LQRRAIQKLREALSKGMPPELNK
NT seq
792 nt
NT seq
+upstream
nt +downstream
nt
atggcacaaccatctcaaaatatgaagctaactaaagaagaggtgaacgagttaatacta
gactttcagaaaacagaaagtaaggtagcccaattggcactcgttgaacactatacaggt
ttagttgaaaccttagcgaagaaatattccaagggaaaaagctttcatgaagatcttaga
caggtgggcatgattggtttactaggcgcaattagaagatatgaccctactattggaaag
ccgtttgaagcttttgctattccaacaataattggagaaatcaagcgtttcttaagagat
aaaacatggagtgttcatgttccgagaaggattaaagaattaggacctaagattaaggca
gctgtagacaagttaacaaatgaaaatcaacgatctccacaagtgagggagatagcggaa
tatttagatgtaactgaagaggaagttttagaaacgatggaaatgggtaaaagctaccag
gctttatcagttgaccattctattgaagctgattctgatggaagtaccgtcaccattctt
gatattgttggttcacaagagcaggggtatgaaaaagtgaatcaaaaattaatgcttcag
agtgtactgcatgttctatcagatcgagaaaaggaaattattgaatgtacgtttattctg
aacaaaagccaaaaagagactggtgaacagttaggaatctcccaaatgcatgtatcaaga
ttgcaaaggagagctattcaaaaattaagagaagcattgtcaaaaggcatgcccccggag
ttaaataaatga
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