Metabacillus litoralis: KDJ21_004410
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Entry
KDJ21_004410 CDS
T08411
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
mlit
Metabacillus litoralis
Pathway
mlit03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mlit00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
KDJ21_004410
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mlit03021
]
KDJ21_004410
03400 DNA repair and recombination proteins [BR:
mlit03400
]
KDJ21_004410
Enzymes [BR:
mlit01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
KDJ21_004410
Transcription machinery [BR:
mlit03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
KDJ21_004410
DNA repair and recombination proteins [BR:
mlit03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
KDJ21_004410
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
HHH_5
DUF961
SAM_EPH
PASTA
Motif
Other DBs
NCBI-ProteinID:
UHA60943
LinkDB
All DBs
Position
complement(875275..876219)
Genome browser
AA seq
314 aa
AA seq
DB search
MIEIEKPKIETVEISDDAKYGKFVVEPLERGYGTTLGNSLRRILLSSLPGAAVTSIQIDG
VLHEFSTIEGVVEDVTSIILNIKKLALKIYSDEEKTLEIDVQGEGSVTASDITHDSDVEI
LNPDLHIATLASDASFRMRLTAKRGRGYTPADSNKREDQPIGVIPIDSIFTPVARVSYQV
EKTRVGQVANYDKLTLDVWTDGSTGPKEAIALGSKILTEHLNIFVGLTDEAQNAEIMVEK
EEDQKEKVLEMTIEELDLSVRSYNCLKRAGINTVQELAHKTEEDMMKVRNLGRKSLEEVK
AKLEELGLGLRKDD
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atgatagaaattgaaaaaccaaaaatcgaaacggttgaaatcagcgatgatgccaaatat
ggtaaattcgtcgtcgagccacttgagcgtggatatggtacaactttgggtaactcctta
cgtcgtattcttttatcctcactccctggtgccgctgtaacatcgatccaaatagatggc
gtacttcatgagttttcaacgatcgaaggtgttgttgaagatgttacttcgattatctta
aacattaaaaagcttgctcttaaaatctattcagatgaagaaaagacgctagaaattgat
gttcaaggcgaaggtagtgtaactgcatccgatattactcatgatagtgatgtagagatt
ttaaatccagatcttcatattgcaactctagcttcagatgctagctttagaatgaggcta
acagctaagcgcggacgtggttatacaccagctgattctaacaaacgtgaagaccagccg
ataggtgttattcctattgactcgatctttacaccagtagctcgtgtttcctaccaagta
gaaaaaacacgtgtaggtcaagttgctaactatgataagttaacgttagatgtttggaca
gatggaagtacagggccgaaagaagcaattgctttaggttctaagatccttacagaacac
cttaatatcttcgtaggtcttactgatgaagctcaaaatgcggagattatggttgaaaaa
gaagaggatcaaaaagaaaaagttcttgagatgacgattgaagaattagatctatctgta
cgttcttacaactgtttaaaacgtgctggaattaatacagtgcaagagttagctcataaa
acagaagaagatatgatgaaggttcgaaatctaggtcgtaaatctcttgaagaagttaag
gcaaaattagaagaactaggtttaggtcttcgaaaagacgactga
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