Metabacillus litoralis: KDJ21_005075
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Entry
KDJ21_005075 CDS
T08411
Symbol
holB
Name
(GenBank) DNA polymerase III subunit delta'
KO
K02341
DNA polymerase III subunit delta' [EC:
2.7.7.7
]
Organism
mlit
Metabacillus litoralis
Pathway
mlit03030
DNA replication
mlit03430
Mismatch repair
mlit03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mlit00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
KDJ21_005075 (holB)
03430 Mismatch repair
KDJ21_005075 (holB)
03440 Homologous recombination
KDJ21_005075 (holB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mlit03032
]
KDJ21_005075 (holB)
03400 DNA repair and recombination proteins [BR:
mlit03400
]
KDJ21_005075 (holB)
Enzymes [BR:
mlit01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
KDJ21_005075 (holB)
DNA replication proteins [BR:
mlit03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
KDJ21_005075 (holB)
DNA repair and recombination proteins [BR:
mlit03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
KDJ21_005075 (holB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNApol3-delta_C
AAA
GFA
Motif
Other DBs
NCBI-ProteinID:
UHA61055
LinkDB
All DBs
Position
complement(990742..991734)
Genome browser
AA seq
330 aa
AA seq
DB search
MDKNWQELVTYQPRVMKLLANSIQKQRLAHAYLFEGKKGTGKKDAGILLAKSFFCENLQT
YEPCDNCKNCRRIDSGNHPDVHIVEPDGLSIKKGQIQALQEEFSKSGVESNKKLYMIIHA
DKMTVNAANSLLKFLEEPNANTIAILITEQYHKILNTILSRCQLLSFHPLQPIAIQETLE
KSGVAKHIAALVSQLTNDLNAALDLTKDDWFAQARLKVIKLYEVLITQKGQAPLFIHTEW
MNHFNDKDKQDTGLDLLLYLYKDVLSIQIGNEENIIYHDIIQQIKQHALQMTQRSVTEKI
TSILEAKKRLHANVNPQLLMEQLVLTLQEG
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atggacaaaaactggcaagaactagtcacatatcaaccgcgtgtgatgaagttattagca
aatagtattcaaaaacaacggttagcacatgcctatttgtttgaaggaaagaaagggaca
ggcaagaaagatgctggaattcttttagcaaaaagtttcttttgtgaaaatcttcaaacc
tatgaaccatgtgataactgtaaaaactgtagaagaatagattcaggaaatcaccctgat
gttcatattgtagaaccagatggattatcaataaaaaagggacaaattcaagctttgcaa
gaagagttttctaagtctggagtagagtccaataaaaagctttatatgattatccatgct
gataaaatgactgttaatgcagctaacagcttattaaagtttttagaagagcctaacgca
aacacaattgccattctaataactgaacagtatcataaaatattaaatacaattctttca
aggtgtcagctattatcctttcacccactacagcctattgcaatccaagaaacccttgag
aagtcaggagtagcgaagcatattgccgcattagtgtcgcaactaacaaatgatcttaat
gctgcattggacttaacaaaagatgattggtttgcgcaggctagattgaaagtgataaaa
ttgtatgaggtccttatcactcaaaaaggacaggcaccattatttatacacacggagtgg
atgaaccactttaatgataaagataagcaagatacagggttagacttgctattatattta
tataaagatgtcttatctatacaaataggtaatgaagaaaacattatttatcatgacatc
attcagcaaataaaacagcatgcccttcaaatgacccaaagaagtgtaacagagaagatt
acttctatattagaagctaaaaaaaggcttcatgccaatgtgaatccacaattacttatg
gagcaattggttttaacattgcaggagggataa
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