Metabacillus litoralis: KDJ21_005510
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Entry
KDJ21_005510 CDS
T08411
Name
(GenBank) sigma-70 family RNA polymerase sigma factor
KO
K03086
RNA polymerase primary sigma factor
Organism
mlit
Metabacillus litoralis
Pathway
mlit02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
mlit00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
KDJ21_005510
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mlit03021
]
KDJ21_005510
Transcription machinery [BR:
mlit03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
KDJ21_005510
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
ATP-synt_10
DUF7278
Motif
Other DBs
NCBI-ProteinID:
UHA61121
LinkDB
All DBs
Position
1079054..1080331
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AA seq
425 aa
AA seq
DB search
MSKNLDDLRSHINDNFRFGSKIEHKIVERWFKEYTLEIEEKFAVYDELDSLQIKIIDLPK
TVFKAKLLKLFKCIELENEINRSILIKWFKQNNLDEGIQENILCDLTRRGYIIIDDTPQE
KNEIGFDIPDDLLENDLDSLLDDDSFIEHVDSLEDVIDKSWNIEYLNQIHSGDESKRNKS
FSNLVKANRKLVWKIVKQYSGLATVGFDVNDMYQVGFIGLIKAAEKFDVSLGYQFSTYAT
WWIRQAITRGIADYSTLIRIPVHYREKMKKFIKIENELWNELARPATTIEISKEMEEPIN
VIEELRFYISQSNLESLDRLVGKDGNTSLGEFVLDENSNMPHEEYCKVELRNTIGEIFQS
NLTEREMQVLYYRFGFNNDETKTLEDIGQIFNLTRERIRQIEVKALNKLRKPKTTTILKE
YLHEY
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaaaatctagatgatctacgttctcatattaatgataattttcgtttcggtagt
aaaatagagcataaaattgttgagcgttggtttaaagaatacacacttgaaattgaagaa
aagtttgccgtttatgatgaactagattctttgcaaataaaaatcattgatcttccaaaa
actgtatttaaggcgaaattattgaagttgtttaaatgtattgagctagaaaatgaaatt
aacagaagtattcttataaaatggttcaaacaaaataatctagatgaaggtatacaagag
aatattctatgcgatctaacgagaagaggctatatcattatagacgatacaccgcaagag
aaaaatgaaattggttttgatatacctgatgatttattagaaaatgatttagattcttta
ttggatgacgacagctttattgaacatgttgattcacttgaagatgttattgataagtca
tggaatattgaatatttaaatcaaatacattcaggtgatgaatcaaaacgaaataagtca
tttagcaatctagttaaagcgaatagaaaattagtttggaagatcgtgaagcagtattca
ggcttagcaacagtgggattcgatgtgaatgatatgtatcaagttggatttattggatta
ataaaggctgcagaaaaattcgatgtttccttgggttatcagttttctacttatgcaact
tggtggataagacaagcgattactagggggatagcggattattcaacattaatacgaatt
ccagttcattatagagaaaaaatgaagaaattcataaaaatcgagaatgaattgtggaat
gaattggctagacctgctacaaccatagagatttctaaggaaatggaagaacccattaac
gttatagaagaattacgcttttatatttcacaaagtaatttagaaagtcttgatcgcctt
gttggaaaagatggaaacacatcattaggtgaattcgtgttagatgaaaattcaaacatg
cctcatgaggaatattgtaaagttgaattaagaaatacaattggtgagatctttcaatcg
aatttaacggagagagaaatgcaagttttatattatcgttttggatttaataacgatgaa
acaaagacattggaggatattggacaaattttcaatttgacaagagaaagaattcgacaa
atagaagtaaaagcacttaataagcttagaaaaccaaaaacgactacaatattaaaggag
tatttgcatgaatattga
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