Metabacillus litoralis: KDJ21_011890
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Entry
KDJ21_011890 CDS
T08411
Symbol
mutM
Name
(GenBank) DNA-formamidopyrimidine glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
mlit
Metabacillus litoralis
Pathway
mlit03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
mlit00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
KDJ21_011890 (mutM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mlit03400
]
KDJ21_011890 (mutM)
Enzymes [BR:
mlit01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
KDJ21_011890 (mutM)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
KDJ21_011890 (mutM)
DNA repair and recombination proteins [BR:
mlit03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
KDJ21_011890 (mutM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
NFACT_N
Fibrinogen_aC
DUF6395
Motif
Other DBs
NCBI-ProteinID:
UHA62257
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All DBs
Position
2443366..2444190
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AA seq
274 aa
AA seq
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MPELPEVETVRRTLLQLVKGKTINGVNIHWPKIIKKPEEPEQFRDAIIGQTIHDVKRRGK
FLKFILDDFVLVSHLRMEGRYGLYQPHEEFDHHTHVIFTFTDQTELRYRDVRKFGTMHLF
KKGEEERTLPLSQLGPEPFSGKFTVDYLRGRLAKTERKIKTALLDQSVVVGLGNIYVDEA
LFRSGIKPDRIASKLTKAEYKILHEQIIKTLEEAVAQGGSTVRSYVNTQGEIGMFQLQLY
VYGRTNEPCKTCGKTLTKTVVGGRGTHFCEQCQK
NT seq
825 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaattaccagaggttgaaactgtacgacgaacgttgcttcagttagtgaaaggg
aaaacaataaacggagtcaatatccattggcctaaaatcataaaaaagccagaagagcct
gaacaatttagagatgcaataattggtcaaacaattcatgatgttaagcgcagaggcaaa
ttcttaaaatttatacttgatgattttgttcttgtttctcatttgcgaatggaaggaaga
tatggtttatatcaaccacatgaggaatttgatcatcatacacatgttattttcacgttt
acagatcaaacggagttaagatatcgggatgttcgaaagttcgggactatgcatttattt
aagaagggagaagaagaacgtacacttccactttctcaattaggtccagagccattttct
ggaaaattcacggtggactatctccgaggtcgtctagcaaaaactgaacggaaaattaaa
acggctttgttagatcaatcagttgttgttggacttgggaatatatatgtagatgaagct
ctttttagatcaggtattaaaccagatcgtatagccagtaaattaacaaaagcggaatat
aagattttacatgagcaaatcattaaaacccttgaagaagcagttgctcaaggaggcagt
actgttcgctcttatgtaaatacacaaggtgaaatcggtatgtttcagcttcaattatac
gtttatggcagaacaaatgagccctgtaaaacatgtggaaaaacattaactaaaacagtt
gtgggcggacgtggaactcatttttgtgagcaatgtcaaaaatag
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