Metabacillus litoralis: KDJ21_012550
Help
Entry
KDJ21_012550 CDS
T08411
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
mlit
Metabacillus litoralis
Pathway
mlit03410
Base excision repair
mlit03430
Mismatch repair
mlit03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mlit00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
KDJ21_012550 (recJ)
03430 Mismatch repair
KDJ21_012550 (recJ)
03440 Homologous recombination
KDJ21_012550 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mlit03400
]
KDJ21_012550 (recJ)
DNA repair and recombination proteins [BR:
mlit03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
KDJ21_012550 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
KDJ21_012550 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
KDJ21_012550 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ssDNA-exonuc_C
RecJ_OB
DHH
DHHA1
Motif
Other DBs
NCBI-ProteinID:
UHA62371
LinkDB
All DBs
Position
2581932..2584286
Genome browser
AA seq
784 aa
AA seq
DB search
MLKAKTRWMVQSSDETLIETLIDNLSITPLVASLLVNRGIHSVEEAREFLETEKQSFHDP
FLLKDMDKAVHRIKTAIEQNEHILVYGDYDADGVSSTTVLLTALRTLGANVDFYIPNRFT
EGYGPNEAAFRHAHEKGFSLIITVDTGIAAVHEAQVAKELGMDLIITDHHEPGPILPEAL
AIIHPKQPGCTYPFKELAGVGVAFKLSHALLGDVPTDLLEVAAIGTIADLVALHDENRLI
AKKGINQLKTTKRIGLKALLKIANVKMDEINEDTIGFALGPRINAVGRLQSADPAVDLLL
SEDEEEASVIAEEIDLLNKERQKLVSTMTEEAIEEVETRFPIEDHPVLVIAREGWNPGVV
GIVASRLVDRFYRPTIVLSIDREKGIAKGSARSIVGFDLFENLSTCRDILPHFGGHPMAA
GMTLNLEDVDSLRERLVEKAKNILTENDFIPVTKVDVSCNLEDISVNSIEEMQLLSPFGM
NNPKPVIQIENVTLANVRKIGSEQNHLKLVFSQEDCQLDCVGFGMGYIHDELSPSVTLSA
IGELSINEWNNLRKPQIMLQDIKVDEWQLFDFRGTRNVDKLVSSVTTLEESIIVTFEETT
HDYVKNLGFEQKAMLVKTKQDALNLSVKNKHVILMDIPSSLDHFDALFSEGKPARIYTVF
QQDSDHFFSTIPTREHFKWYYGFLLKKGSFKLHERGKQLAAHKGWTKETIEFMSQVFFEL
EFVTIENGVISTNSSTRKRDLTESKTYAQKQMRLELEKTLLYTSYMQLKQWFEERFPLDA
PVGV
NT seq
2355 nt
NT seq
+upstream
nt +downstream
nt
atgttaaaggcaaaaacaagatggatggttcaatcatctgatgaaaccttaattgaaaca
cttattgataacttatccattacaccgttagtcgcatctttacttgtaaatagaggcata
cattcagtagaagaagcacgcgaattcttggaaactgaaaaacaatcttttcatgatccg
tttcttctaaaagatatggacaaggctgtccaccgaataaaaacggcgatagaacaaaat
gagcatatattagtttatggagattatgatgctgatggagtaagcagtacaactgtatta
ttaacagctttacgtactctgggtgcaaacgtagatttctatattccaaatcgatttacc
gagggttatggaccaaatgaagcagcttttagacatgcacatgaaaagggcttttcttta
atcattacagttgatacaggaattgcagctgttcatgaagcacaagtggcaaaagaatta
gggatggatttgattattacagaccaccatgagccaggtccgattcttccagaagcactt
gcgattatccatccaaaacaaccaggatgtacctatccttttaaggagcttgctggagtt
ggcgttgcctttaaattaagtcatgctctgcttggtgatgttccaactgatttattagaa
gtagcagcaataggaacaatcgcagatttagtagcacttcatgatgaaaatagattaata
gctaaaaaaggtataaaccagttaaaaacaacaaaacgtattggactaaaagcgttatta
aaaattgccaatgtcaagatggatgaaataaatgaggatacgataggttttgcactgggg
ccacgaattaatgcagttggtcgtttacaatcagctgaccccgccgtggaccttctcctt
tctgaagatgaagaggaagcttcagttattgctgaggaaattgatttgcttaacaaagaa
cgtcagaaacttgttagcacaatgacagaagaagcaatcgaggaggtagaaacccgtttt
ccaatcgaggatcatccagttcttgttattgctagagaaggctggaatccaggtgtggtg
ggaatagttgcatcaaggcttgtagaccgcttttatcgtccaacaattgttttaagcatt
gatagagaaaaaggaattgcaaaagggtcagcccgaagtatcgttggctttgatttgttt
gaaaatctatcaacatgtcgcgatattcttccgcattttggagggcaccccatggctgca
ggtatgacattaaatctggaagatgttgattcactacgagaaagacttgttgaaaaggca
aaaaacatattaacagaaaatgattttataccggtaacaaaagtggatgtaagctgtaat
ctagaagatatttcagttaattcaattgaagaaatgcaacttctttcaccctttggtatg
aataaccctaaacctgtcattcaaatagagaatgttacattggcaaatgttcgaaaaatt
ggttctgaacaaaatcatttaaagctggttttttcgcaagaagattgtcagcttgattgc
gttgggtttggtatggggtatatccatgatgaactgtcaccctctgttactttatcggca
attggggaattatctattaatgagtggaataatcttcgcaaaccccaaatcatgttacaa
gatatcaaggttgatgagtggcagttgttcgattttagaggaacaagaaatgtcgacaag
ctagtgagttcagtgacaactttagaagagagcatcattgttacttttgaggaaacaacg
catgattacgtgaagaatttaggcttcgaacaaaaagcaatgttagtaaaaacaaaacaa
gatgccctaaatctatctgttaaaaataaacatgttattttaatggatattccatcatca
cttgatcattttgatgcgcttttttctgaaggaaagccagcaagaatttacacagtgttt
caacaggattcagatcacttcttttcaacgattccaacaagagaacactttaaatggtat
tatggatttctgttaaagaaaggctctttcaagctccatgagcgaggtaaacaacttgcg
gctcacaagggatggacaaaagaaacaattgagttcatgtcacaggtgttttttgaacta
gaatttgttacaatagaaaatggtgttatttcgacaaattcttcaactcgaaaacgagat
ttaacagaatcgaaaacatatgcccaaaaacaaatgagattagaattagaaaaaacgtta
ttatatacatcttacatgcagcttaagcagtggtttgaagaaagatttccattagatgcg
cctgtaggtgtataa
DBGET
integrated database retrieval system
