Metabacillus litoralis: KDJ21_012635
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Entry
KDJ21_012635 CDS
T08411
Name
(GenBank) ATP-dependent RecD-like DNA helicase
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
mlit
Metabacillus litoralis
Pathway
mlit03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mlit00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
KDJ21_012635
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mlit03400
]
KDJ21_012635
Enzymes [BR:
mlit01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
KDJ21_012635
DNA repair and recombination proteins [BR:
mlit03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
KDJ21_012635
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_30
AAA_19
HHH_RecD2
OB_YrrC
SH3_13
UvrD_C_2
Viral_helicase1
AAA_11
HHH_5
UvrD-helicase
AAA_22
T2SSE
AAA_5
AAA
nSTAND3
AAA_16
UvrD_C
NPHP3_N
NTPase_1
AAA_28
ABC_tran
TsaE
AAA_29
HHH
AAA_17
Motif
Other DBs
NCBI-ProteinID:
UHA62385
LinkDB
All DBs
Position
2601140..2603524
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AA seq
794 aa
AA seq
DB search
MQESADLFGEKERYVKGLVKVVIFHNEQNLYSVLKVRVHETSEDIEDKEITVTGYFPFLH
EDDTYTFFGSFTNHPKFGLQFQTEHFRKEIPQTKEGIIQYLSSDLFKGIGKKTAEAIVEK
LGESAISKILQNPSILDDIPKVNKDKAKQLVDALISHQGLEQIMIALNQFGFGPQLAMKI
YQTYQDETLTIIQENPYQLVQDVEGIGFVRADELGEHLGISGKSAERIKAACHYNVEHLC
LQEGHVYVTTEQLIVKTKELLDHSKKETIHESDIANEIIALGKEGKMIVEENRAYLPSLY
FAEQGLVKNINKILDQTEYEDLFPESEFLLSLGNLEERMNVQYAPTQKDAIQKALMSPML
LLTGGPGTGKTTVIKGIVELYSDLHGCSLDPKDYKKEETFPIVLVAPTGRAAKRMSEATG
MPAVTIHRLLKWNGADGFEHDEENPIAGKLLIIDEVSMVDIWIANQLFKALPKEIQVIMV
GDEDQLPSVGPGQVLRDLLASQVIPTVRLTDIYRQAEGSSIIELAHDIKEGRLPQNIAAP
TSDRSFIRCSQVQMKEVIGKIIQSALKKGYTARDIQILAPMYRGPAGIDQLNKLLQELFN
PKASGKRELKFGDVVYRNGDKVLQLVNQPDSNVFNGDIGEIVSIFYAKENTEKEDMIVVS
FDGNEVTYTKQDFNQFTHAFCCSIHKSQGSEFPIVIMPIVKGYYRMLRRNLIYTAVTRSK
KSLVLCGELDALEWGIKNNESSERQTSLMLKLGADQIKDLELDELQKQLPFPLEDANIGM
ENLTPYDFMEASEI
NT seq
2385 nt
NT seq
+upstream
nt +downstream
nt
atgcaggagagtgcagatttatttggagaaaaagagcgctatgtcaaaggactagttaag
gttgttatctttcataatgaacaaaatctttattcagtgctaaaagtaagagtacatgaa
acgagtgaagatatagaagataaagaaataactgttactggttactttcccttcctgcat
gaagatgatacctatactttttttgggtcgtttacaaatcatcctaagtttggacttcaa
tttcaaaccgaacattttcgaaaggaaattcctcaaacaaaagaagggatcatacaatat
ctttcaagtgatctttttaaaggtatcggaaaaaaaacagcggaagcaatcgttgaaaaa
ttgggtgaatccgctatttcgaaaattttacaaaacccctccattttggatgatattcct
aaggtgaataaagataaagcaaaacaattggttgatgcgctaatttctcatcaaggtctt
gagcaaatcatgattgcgctaaatcagtttggatttggtccacagcttgcgatgaagatc
tatcaaacttaccaagatgaaacattaaccatcattcaggagaatccttatcaattggta
caggatgtagaaggaattggttttgttcgcgctgatgagcttggagaacaccttggtatt
tcgggaaaaagtgctgaacgtattaaagcagcttgtcattacaatgtcgagcacctttgc
ctacaggaaggtcatgtttatgtgacaactgagcagctaattgttaaaacaaaggagctc
cttgatcactctaagaaagaaaccattcacgagtctgatattgcaaatgagatcattgca
ctaggtaaagaggggaaaatgattgttgaagaaaaccgtgcttaccttccatcactctat
tttgctgaacagggattggtgaaaaatattaataagatccttgatcaaacagaatatgag
gatttatttcctgaatctgaatttttattatctctggggaacctcgaggaaagaatgaat
gtgcagtatgcaccaacacaaaaagatgcgattcagaaggcgctaatgtcaccaatgtta
ctactaactgggggacctggtacaggaaaaacaaccgttattaaagggattgtagaattg
tattcagatttacatggatgttctcttgatcctaaagattataaaaaggaagaaactttt
ccaattgtacttgtagctccaacagggagagcagcaaaacgtatgagtgaagccacagga
atgccggcggtcacgattcaccgtcttttaaaatggaatggtgcggatggttttgaacac
gatgaagaaaacccgattgcaggcaaacttctgatcattgatgaggtctcaatggttgat
atatggattgccaaccaattatttaaagctttgcctaaagaaattcaggttatcatggta
ggcgatgaggatcagcttccttcagttggtcctggtcaagtgcttcgtgatttattggcc
tctcaagtgataccaacggtccgtctgacagatatttaccgtcaggcagagggatcttct
attattgaacttgcccacgatataaaggaaggtagacttccacaaaatattgcggcacca
acttcggaccgttcgtttattagatgctcacaagttcagatgaaagaagttataggtaaa
atcatacaaagtgcactgaaaaaaggatatacagcgagagatatacaaatcctggcacca
atgtatagaggacctgctggtattgatcagctaaataaattacttcaagagctttttaat
ccaaaagcatctggtaaaagagaattgaagttcggggatgttgtgtaccgaaatggtgat
aaagtgctgcagctcgtgaatcagcctgatagcaatgtatttaatggagatattggagag
attgtatccattttttatgcgaaagaaaataccgaaaaagaagatatgatcgtagtttca
ttcgatggtaatgaagtaacgtatacgaaacaagattttaatcaatttacgcatgccttt
tgttgctccattcataaatcacaaggaagtgagtttccaattgtgattatgcctattgtt
aaaggatactatcgaatgctaagacgaaacttaatttatacagcagtaacaagaagtaaa
aaatctcttgttttatgtggggagttagatgctttagagtggggcattaaaaataatgaa
agttccgaaagacaaacaagcttaatgttaaagcttggagcggatcaaataaaagatcta
gaacttgatgaattacaaaaacaattgccattccctcttgaggatgcaaatattggcatg
gaaaaccttacaccgtatgactttatggaagctagcgaaatataa
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