Metabacillus litoralis: KDJ21_020455
Help
Entry
KDJ21_020455 CDS
T08411
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
mlit
Metabacillus litoralis
Pathway
mlit03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mlit00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
KDJ21_020455
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mlit03019
]
KDJ21_020455
03009 Ribosome biogenesis [BR:
mlit03009
]
KDJ21_020455
Enzymes [BR:
mlit01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
KDJ21_020455
Messenger RNA biogenesis [BR:
mlit03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
KDJ21_020455
Ribosome biogenesis [BR:
mlit03009
]
Prokaryotic type
rRNA helicases
KDJ21_020455
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
UvrD-helicase
DUF4391
Cas3-like_C_2
AAA_19
SecA_DEAD
Flavi_DEAD
AAA_22
mRNA_decap_C
Motif
Other DBs
NCBI-ProteinID:
UHA62649
LinkDB
All DBs
Position
complement(4046245..4047549)
Genome browser
AA seq
434 aa
AA seq
DB search
MTEFLKLGIRKEVNDTLKSLGLMKPTPIQEQTIPKVLEGRDVIAQAQTGTGKTLAFVLPI
LEKIDVSQSEVQALILTPTRELAQQISKEIKKMIENLEGVNVLAVYGGQDVEHQLKKLRG
AQHIVVATPGRLLDHIRRKTIDLSTVTMLVLDEADQMLHMGFLPEVEDIIYETLSTRQTM
LFSATMPDEIRALAKKYLMNPENIQVKAKNLTVDKIKQIVIETTDRRKQATLLHLLQEQR
PFLAIIFCRTKIRAKKLQEALIANGYESDELHGDLTQAKREKAMKRFREAKIQFLVATDV
AARGLDVEGVTHVFNYDIPHDVESYIHRIGRTGRAGGVGIAYTLVAPKDMDFLRMIEKGI
HQSMEKQVIRGISVPDREDYDKERKEQIRKESRPFNRGGKTNPRRNSDSNQPTKERNKRG
SKSASKDGRRNRQR
NT seq
1305 nt
NT seq
+upstream
nt +downstream
nt
ttgactgaatttttaaaattaggtattcgaaaagaagtgaatgatacattaaaatcttta
ggactaatgaagccaacacctattcaagaacaaacaattccaaaagtattagagggaaga
gatgtgattgcacaggctcaaaccggtacagggaaaacacttgcatttgttcttcccatt
ttagaaaaaattgatgtaagtcaatctgaggttcaagcacttattttaactccaacaaga
gaattggcacaacaaatatcaaaagaaataaaaaagatgattgaaaatttggaaggtgta
aatgttcttgccgtttatggtggacaagatgttgaacaccagttgaaaaagcttagaggg
gcccaacatattgttgtagcaacaccaggaagattgcttgatcatattcgccgtaaaaca
attgatttatcaactgttacaatgcttgttttagatgaagcagatcaaatgttacatatg
ggctttttgccagaagtagaagatattatttatgaaacactttccactcgacaaacgatg
ttattctctgcaacaatgcctgatgaaattcgggcattagctaaaaaatatttaatgaat
ccggaaaatatacaagttaaagcaaaaaatctgacagttgataagataaaacaaattgtg
attgaaacaactgacagaagaaagcaagccaccttgttgcatctgttgcaagagcagcga
ccttttttagcgattattttttgccgaacaaaaattcgagcaaaaaagcttcaagaagca
ttaattgctaatggctatgaatccgatgaattacacggcgatctaactcaagctaagcgg
gaaaaggcgatgaaacggtttagagaggctaaaattcagttccttgtcgcaactgatgtt
gcagcaagaggccttgatgtggaaggtgtgacacatgtttttaactatgatattcctcac
gatgtagaaagctatattcaccgaattggtcgaacaggtagggcaggtggagtaggtatt
gcctatacacttgtggcaccaaaagacatggattttttacgaatgatcgaaaaaggtatt
catcaatctatggaaaaacaggttattagagggattagtgtccctgatcgagaagattat
gataaagaaagaaaagaacaaataagaaaagaaagtcgtccatttaatagagggggaaaa
acgaatcctcgaagaaactccgattccaatcaaccaacaaaagaacggaataaaagagga
tcaaaatctgcttctaaagatggaagaagaaatagacaaagataa
DBGET
integrated database retrieval system
