Metabacillus litoralis: KDJ21_020965
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Entry
KDJ21_020965 CDS
T08411
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
mlit
Metabacillus litoralis
Pathway
mlit03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mlit00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
KDJ21_020965 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mlit03019
]
KDJ21_020965 (pnp)
03016 Transfer RNA biogenesis [BR:
mlit03016
]
KDJ21_020965 (pnp)
Enzymes [BR:
mlit01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
KDJ21_020965 (pnp)
Messenger RNA biogenesis [BR:
mlit03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
KDJ21_020965 (pnp)
Transfer RNA biogenesis [BR:
mlit03016
]
Prokaryotic type
tRNA degradation factors
KDJ21_020965 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
KH-I_KHDC4-BBP
SPATA25
Motif
Other DBs
NCBI-ProteinID:
UHA59246
LinkDB
All DBs
Position
complement(4147780..4149900)
Genome browser
AA seq
706 aa
AA seq
DB search
MGQDKQTFSIDWAGRNLTVEIGQLAKQANGSVMIRYGDTAVLSTATASKDPKPLDFFPLT
VNYEERLYAVGKIPGGFIKREGRPSEKAILASRLIDRPIRPLFADGFRNEVQVISIVMSV
DQNCSSEMAAMFGSSLALCVSDIPFEGPIAGVTVGRINNEFVINPTVEQAEQSDIHLVVA
GTKDAINMVEAGADEVPEETMLEAIMFGHEEIKRLISFQEEVAAAVGKEKMEIELFDLDA
DLEKEIREFAEGDLLQAIQVQEKHAREDAISAVKNKVVEKYVEQEADESTIKMVKQILSK
LVKAEVRRLITEEKVRPDGRGVDEIRPLSSEVGLLPRTHGSGLFTRGQTQALSICTLGAL
GDVQILDGLGIEESKRFMHHYNFPQFSVGETGPMRGPGRREIGHGALGERALEPIIPSEK
DFPYTVRLVSEVLESNGSTSQASICASTLAMMDAGVPIKAPVAGIAMGLVKSGEHYTVLT
DIQGMEDALGDMDFKVAGTDKGVTALQMDIKIEGLSREILEEALQQAKKGRMEILKSMLA
TISTPKGELSQYAPKILTMKINPDKIRDVIGPSGKQINKIIEETGVKIDIEQDGTVFISS
VNDEMNQKAKKIIEDLVREVVVGQLYLGKVKRIEKFGAFVEIFAGKDGLVHISELAEERV
GKVEDVVSIGDELLVKVTEIDKQGRVNLSRKAVLKEQKENQPEQQG
NT seq
2121 nt
NT seq
+upstream
nt +downstream
nt
atgggacaagataaacaaacgttctccatagattgggcaggtcgaaaccttactgttgaa
attggccagcttgcaaaacaagcaaacggatctgtaatgattcgttacggcgatacagca
gttttaagtactgctaccgcttcaaaagatccaaaacctttagatttttttccgttaaca
gttaattacgaggagcgtttatatgctgtagggaaaatcccaggaggatttatcaagaga
gaaggaagaccaagtgaaaaagctatattggccagccgattaattgatcgtccaattaga
cctttatttgctgatggttttagaaatgaagttcaggttattagtattgtgatgagtgtt
gatcaaaattgttcttctgaaatggctgcaatgtttggatcttcattagcactttgtgta
tctgatattccttttgagggaccgattgcaggtgtaactgttggaagaatcaataatgaa
tttgttattaacccaacagttgaacaagcagaacaaagtgatattcatttagtagtagct
ggtacaaaagatgcgattaatatggttgaagctggtgctgatgaagttccagaagaaaca
atgttagaagctattatgtttggacatgaagaaataaaacgtttaatttctttccaagag
gaagtagctgcagctgttggaaaagaaaaaatggaaattgaactatttgatcttgatgca
gaccttgaaaaagaaattcgagagtttgcagagggtgacttattacaagctattcaggtt
caagagaaacatgctcgtgaagatgcaatcagcgctgtgaaaaacaaagttgttgagaaa
tatgtggaacaagaagctgatgagagcaccattaagatggttaaacaaatcttatcaaaa
cttgttaaggcggaagtacgtcgattaattacagaagaaaaagtaagacctgatggacgt
ggtgttgatgaaattcgcccactgtcttctgaagttgggttattacctagaacacatggt
tcagggttgtttacacgtggacaaactcaagcattaagtatatgtacacttggagcgctt
ggggatgttcaaattcttgatggacttggtatcgaggaatccaaacgctttatgcaccat
tacaacttcccgcaatttagcgttggtgaaactggacctatgagaggaccaggacgacgt
gaaattggacatggtgcgttaggtgaaagagcattagaaccaattattccatctgagaaa
gattttccatatacagttcgcttagtatcagaagttcttgaatcaaatggttctacttca
caagcaagtatttgtgcaagtactttagcaatgatggacgctggtgtacctattaaagct
cctgttgccggaattgcaatgggacttgtaaaatcaggagaacactatacagttttaaca
gacatccaaggtatggaagatgctcttggtgatatggactttaaagtagctggtactgat
aaaggtgtaacggctttacaaatggatattaaaatagaaggcttatcaagagaaatactt
gaagaagcactacaacaagcgaaaaagggtcgtatggaaatattaaaatcaatgcttgct
accatttctactccaaaaggtgagctttctcaatatgcacctaaaatcttaacaatgaag
attaatccagataaaattagagatgttattggtccaagtggaaagcaaattaataaaatt
attgaagaaactggagtaaagattgatatcgaacaagatggtactgtcttcatttcatca
gtaaatgatgagatgaaccaaaaagcaaagaaaattattgaagatctcgtacgagaagtt
gttgttggacaactatatcttggtaaagtaaaacgaattgaaaaattcggagcatttgta
gaaatttttgcaggtaaagatggtttagttcacatatcagagcttgcagaggaacgtgtt
ggaaaagttgaagacgttgtgtcaattggtgacgagctactagttaaggtaactgaaatt
gataaacaaggtcgtgttaatttatctagaaaagcagtattgaaagaacaaaaagaaaat
caaccagaacagcaaggttga
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