Microbacterium limosum: RYJ27_00845
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Entry
RYJ27_00845 CDS
T09965
Name
(GenBank) PKD domain-containing protein
Organism
mliy
Microbacterium limosum
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PKD_4
PKD
K319L-like_PKD
Laminin_G_3
DUF5122
Bact_surface_Ig-like
Laminin_G_2
Big_13
InlK_D3
Rax2
Laminin_G_1
Big_9
Motif
Other DBs
NCBI-ProteinID:
WOQ69828
UniProt:
A0AAU0MGX9
LinkDB
All DBs
Position
169971..175850
Genome browser
AA seq
1959 aa
AA seq
DB search
MNASTRHLRRLAAMVTSAAVIVAGTVLFAGTAASAADLPSPAPFLQRDDSIVTADPLPTV
QIDSGYVWAQTTIGNTVYAAGSFSNARAPLAAPGTNLTPRTNILAYDITTGALLSFAPSV
NGVIRSIAASPDGTRIYIGGSFNSVNGQTRWNVAALDAVTGQLVGGFAPSVGGAGVYGIA
VTAGTVYVAGSFTQANNVARQNLAAFNAATGALQTWAPTSDLQVDALVVEPGTGRLIAGG
RFYQVNGAVQRGLAALDPATGATFTGWQAPASIRNGWNDGEFAGRAGIFALSTDATGVYG
TGWVFANASVGNLEGTFAADAGTGALRWVADCHGDHYGVYSNGSAVYTTSHTHQCDTVGI
WPEMPTRQYRYVEAYTTDARGTLTRSPSTGSLYQSWEGTPSPAVYSWFPDFTVGTASGLG
QAGLSITGAGQYISVAGEFTTVNNQRYQGIVRFATNPSTGKNQGPRLSGSTWQPTARSLT
PGRVRVSVAMNWDRDDRDLTYELLREGAATPVVTRELVSRWWDPASIILEEKGLDPGSTQ
TYRVRATDGDGNTVTSAPVSVEVADGEVSLYADTVLDDGASLYYPLGDITQDWAGSNPLV
AGSGVASVEPGAVQGSTGQSASDFNGTSNGRVTAGDRVAPGAEFSVEIWFKTSTTRGGKL
IGYGNSRTGTSGSHDRHIYMQNNGRLTFGVYPGSVRTVSTTSSYNDNQWHHVVATQGAGG
ISLYVDGELVGTDPSATTAQNYSGYWRIGGDNLSGWPNRPTSNWFDGALDEAAVYPSALS
ASQVLAHHAAGLGLEAPTAAFTSSSADLLASFDGSASTSPDGRAIESYEWDFGDGATGTG
VTVTHEYAGAGTYDVTLTVTDEAGLSRSVTQPVNVAAPNQLPSAAFDAVVNSLTATVNGS
GSSDPDGTIAEYSWNWGDGTPDGSGSTASHVYAADGDYTVTLTVTDDRGGQAASARTVSV
SHVAPVASFTAATAGLGVSVDATASSASDGASLEYAWEWGDQSAASSGVGASHTYATAGT
YTVSLTVTDSFGAVNTSSQEVSVSAVTFAAADDFERSVGSGWGSADAGGAWSAMYGAASV
GSVSGGKGVVTLPAGNTRNFALQGVSVRDSSTSVQFSVGDAPSTGNSYVGVAARQTSSVD
YTTRVWMRSDGSVWLVVQRSGTVLAAPALNGVSWAAGDVFTMKTEVSGVSPTTIRSKVWK
EGTAEPANWQASVTDSTPGLQQAGFVSTHFARAGSASAPATVSFDGFRVTDLQAPVTPPA
NVAPVASFSSAVSDLVVQVDGSGSSDADGSVVSYAWGWGDGSAAGSGATASHTYAAAGTY
TVSLTVTDDDGATHTTTGQVTVTAPDDEEPPAGEFAAADDFERSVGSGWGSADAGGAWSA
MYGAASVGSVSGGKGVVTLPAGNTRNFALQGVSVRDSSTSVQFSVGDAPSTGNSYVGVAA
RQTSSVDYTTRVWMRSDGSVWLVVQRSGTVLAAPALNGVSWAAGDVFTMKTEVSGVSPTT
IRSKVWKEGTAEPANWQASVTDSTPGLQQAGFVSTHFARAGSASAPATVSFDGFRVTDLQ
APVTPPANVAPVASFSSAVSDLVVQVDGSGSSDADGSVVSYAWGWGDGSAAGSGATASHT
YAAAGTYTVSLTVTDDDGATHTTTGQVTVTAPDDEEPPANVAPVASFSSAVSDLVVQVDG
SGSSDADGSVVSYAWGWGDGSAAGSGATASHTYAAAGTYTVSLTVTDDDGATHTTTGQVT
VTAPDDEEPPAGEFAAADDFERSVGSGWGSADTGGAWSVLYGPAASATVTAGKGTVTLST
SETRNFLLNATPVRDADVRVDVALDAAPSTGNSYVGVVARQGASENYQVRVWLRTDGSVW
LVAQRGGTVLGVYPVPGLTRAAGDTFTLRASVTGADPTTIAAKIWRAGQPEPADWQISVT
DATAGLQAAAPVGLHANRAGATTTPGVFTFDAFRLTDVQ
NT seq
5880 nt
NT seq
+upstream
nt +downstream
nt
atgaacgcgtccacgcgccaccttcgtcggctggccgccatggtcaccagcgccgccgtg
atcgtcgccggcaccgtgctcttcgccggcaccgcggcatccgccgcggacctgccctcg
cccgcgccgttcctgcagcgcgacgactcgatcgtcaccgccgatccgctcccgacggtg
cagatcgattccggctacgtctgggcccagacgacgatcgggaacacggtgtacgcggcg
ggaagcttctcgaacgcgcgcgcaccgctcgccgcgcccgggacgaacctgacgccgcga
acgaacatcctggcgtacgacatcacgacgggcgcgctgctctcgttcgctccctccgtc
aacggtgtcatccgctcgatcgccgcgtctccggacggcacgcgcatctacatcggcggc
tcgttcaactccgtcaacggtcagacgcggtggaacgtcgccgcgctcgacgccgtgacg
ggccagctcgtcgggggcttcgccccgtccgtggggggcgcgggcgtctacgggatcgcg
gtcacggccggaaccgtctacgtcgcgggaagcttcacgcaggcgaacaatgtcgcgcgt
cagaacctcgccgcgttcaacgctgcgacgggcgctctccagacatgggctcccacgtcg
gatctgcaggtggacgccctcgtggtcgaaccggggaccggccggctcatcgcgggcggt
cgcttctatcaagtgaatggcgcggttcagcgcggtctcgccgcgctcgacccggcgacg
ggagcgaccttcaccggttggcaggctcccgcctcgatccgcaacggctggaacgatggc
gagttcgccggtcgtgccggaatcttcgccctctccaccgacgcgaccggggtctacggg
acgggctgggtcttcgcgaatgcctcggtcggcaacctcgaggggaccttcgccgccgac
gcgggaaccggcgcgctccgctgggtggccgactgccatggcgaccactacggcgtctac
tccaacggcagcgccgtgtacaccacgagccacacccaccagtgcgacacggtcggcatc
tggccggagatgccgacgcgtcagtaccgctacgtcgaggcgtacacgaccgacgcacgc
ggcacgctcacccgctccccttcgacggggtcgctctatcagagctgggagggcaccccc
tcgccggccgtctacagctggttccccgacttcacggtgggcacggcgtcgggcctcggc
caggccggtctgtcgatcacgggagccgggcagtacatctcggtcgccggcgagttcacg
acggtcaacaaccagcggtaccaggggatcgtgcgcttcgcgaccaacccgagcacgggg
aagaaccagggtccgcgactctccggaagcacctggcagcccaccgcaagatcgctgacg
cccggtcgtgtgcgtgtgtcggtcgccatgaactgggatcgagacgaccgcgacctcacc
tacgagctgctgcgcgagggcgcggccactccggtggtcacacgggaacttgtgtcgcgg
tggtgggatcccgcgagcatcatcctcgaggagaagggcctcgacccgggttcgacgcag
acctaccgcgtgagggcgacggacggtgacggcaacaccgtcaccagcgcgcccgtgagc
gtcgaggtcgccgacggcgaggtctcgctctacgccgacaccgtgctcgacgacggggca
tccctctactatcccctcggcgacatcacccaggactgggctggctcgaacccgctggtc
gcgggaagcggcgtcgcgtcggtggagccgggggccgttcagggcagcaccggtcagagc
gcatccgacttcaacggaacctccaacggtcgtgtgacagcgggcgatcgcgtcgcgccc
ggtgcggagttctcggtggagatctggttcaagacctcgacgacgcggggcggcaagctg
atcggctacggcaattcccgcacgggaacatcgggaagccatgatcggcacatctacatg
cagaacaacggccggctgacgttcggcgtctatccgggttcggtgcgcacggtgtccacg
accagctcctacaacgacaaccagtggcatcacgtggtcgcgacccagggcgcagggggc
atctcgctctatgtggacggcgagctcgtgggcacagacccgtcggccacgacagcccag
aactactccgggtactggcggatcggcggagacaacctcagcgggtggccgaaccggccg
acgtcgaactggttcgacggagcgctcgatgaggccgccgtctatccgagtgcgctctcg
gcgtcgcaggtcctcgcgcatcacgcggccggtctcggtctcgaagccccgaccgcggcg
ttcacgtcctcgtcggccgacctcctcgcatccttcgacgggtcggcgtcgaccagcccg
gacggccgagccatcgagtcctacgagtgggacttcggcgacggcgcgaccggcacgggc
gtgacggtgacccacgaatacgccggcgccggtacctacgacgtcaccctgacggtgacc
gacgaggccgggctgagccgctccgtcacgcaacccgtgaacgtcgcggcgccgaatcag
ctgccgagcgctgccttcgatgccgtcgtgaacagcctgacggcgaccgtgaacgggtcg
gggtcgtccgacccggacggaacgatcgcggagtacagctggaactggggtgacggaaca
ccggacggttcgggatcgaccgcatcgcacgtgtacgccgccgatggcgactacacggtc
acgctgacggtcacggacgaccgagggggacaggcggcgtcggcacgcaccgtctcggtc
agccacgtggcgccggtcgcctcgttcaccgcggccaccgcgggcctgggggtgtccgtc
gacgcgaccgcgtcctcggcatccgacggcgcgtccctcgagtacgcgtgggagtggggc
gaccagagcgcagcttccagcggtgtgggagcctctcacacctacgcgacggcggggacg
tacacggtgtcgctgacggtcaccgactccttcggggcggtgaacacgagctcccaggag
gtctcggtctcggccgtgacgttcgctgcggcggatgatttcgagcggtcggtgggttcg
gggtggggttccgctgatgctggtggggcgtggtctgcgatgtatggggctgcgtctgtg
gggtcggtgtccgggggtaagggtgtggtgactcttcctgcggggaacactcggaatttc
gcgttgcagggtgtgtcggtgcgggattcgtcgacgtcggtgcagttctcggtgggggat
gcgccgtcgacggggaactcgtatgtgggggttgcggcgcggcagacgtcgtcggtggat
tacacgacgagggtgtggatgcgcagtgatggttcggtgtggcttgtggtgcagcgttcg
gggacggtgcttgcggcgccggcgttgaacggggtgtcgtgggctgcgggtgatgtgttc
acgatgaagacggaggtgtcgggtgtgagcccgacgacgatccggtcgaaggtgtggaag
gaggggacggcggagccggccaactggcaggcgtcggtcaccgattccacgccggggctg
cagcaggcgggtttcgtgagtactcacttcgctcgtgcggggtcggcgtcggcgccggcg
acggtgtcgttcgacgggttccgggtgacggatctgcaggctccggtgactcctccggcg
aatgttgctccggtggcgtcgttctcgtcggcggtgtctgatctggtggtgcaggtggac
gggtcggggtcttcggatgctgatggttccgtggtgtcgtatgcgtggggatggggtgat
ggttccgcggcggggtcgggggccacggcgtctcacacgtatgcggcggcggggacgtac
acggtgtcgttgacggtgaccgatgatgacggtgccacgcacaccacgacgggtcaggtg
acggtgacggcaccggatgacgaagagcccccggcgggcgagttcgctgcggcggatgat
ttcgagcggtcggtgggttcggggtggggttccgctgatgctggtggggcgtggtctgcg
atgtatggggctgcgtctgtggggtcggtgtccgggggtaagggtgtggtgactcttcct
gcggggaacactcggaatttcgcgttgcagggtgtgtcggtgcgggattcgtcgacgtcg
gtgcagttctcggtgggggatgcgccgtcgacggggaactcgtatgtgggggttgcggcg
cggcagacgtcgtcggtggattacacgacgagggtgtggatgcgcagtgatggttcggtg
tggcttgtggtgcagcgttcggggacggtgcttgcggcgccggcgttgaacggggtgtcg
tgggctgcgggtgatgtgttcacgatgaagacggaggtgtcgggtgtgagcccgacgacg
atccggtcgaaggtgtggaaggaggggacggcggagccggccaactggcaggcgtcggtc
accgattccacgccggggctgcagcaggcgggtttcgtgagtactcacttcgctcgtgcg
gggtcggcgtcggcgccggcgacggtgtcgttcgacgggttccgggtgacggatctgcag
gctccggtgactcctccggcgaatgttgctccggtggcgtcgttctcgtcggcggtgtct
gatctggtggtgcaggtggacgggtcggggtcttcggatgctgatggttccgtggtgtcg
tatgcgtggggatggggtgatggttccgcggcggggtcgggggccacggcgtctcacacg
tatgcggcggcggggacgtacacggtgtcgttgacggtgaccgatgatgacggtgccacg
cacaccacgacgggtcaggtgaccgtgacggcaccggatgacgaagagcccccggcgaat
gttgctccggtggcgtcgttctcgtcggcggtgtctgatctggtggtgcaggtggacggg
tcggggtcttcggatgccgatggttccgtggtgtcgtatgcgtggggatggggtgatggt
tccgcggcggggtcgggggccacggcgtctcacacgtatgcggcggcggggacgtacacg
gtgtcgttgacggtgaccgatgatgacggtgccacgcacaccacgaccggtcaggtgacc
gtgacggcaccggatgacgaagagcccccggcgggcgagttcgctgcggcggatgatttc
gagcggtcggtgggttcggggtggggttctgccgacacgggcggggcgtggagcgtgctc
tacggcccggcggcgagcgcgaccgtcacggctgggaaggggaccgtgaccctgtcgacg
tccgagacccgtaacttcctgctcaacgcgacgccggttcgcgacgccgacgtgcgggtg
gacgtcgccctcgacgcggcgccgtcgacgggcaactcctacgtgggtgtcgtcgcgcgc
cagggagcaagcgagaactaccaggtcagggtgtggctgcgaacggacggcagcgtctgg
ctggtcgcgcagcgcggcggaacggtgctgggggtgtaccccgtgcccgggctgacgcgt
gcggcgggcgacaccttcacgctccgtgccagcgtcaccggcgcagaccccacgacgatc
gccgccaagatctggcgggccggccagccggagcccgccgactggcagatctcggtcacc
gacgcgacggcggggctgcaggccgcggcacccgtcgggctccacgcgaaccgcgccggg
gccacgacgacaccgggggtcttcacgttcgacgcgttccggctgaccgacgtgcagtga
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