KEGG   Microbacterium limosum: RYJ27_02090
Entry
RYJ27_02090       CDS       T09965                                 
Name
(GenBank) SMC family ATPase
  KO
K03546  DNA repair protein SbcC/Rad50
Organism
mliy  Microbacterium limosum
Brite
KEGG Orthology (KO) [BR:mliy00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:mliy03400]
    RYJ27_02090
DNA repair and recombination proteins [BR:mliy03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     RYJ27_02090
    Archaeal homologous recombinant proteins
     RYJ27_02090
SSDB
Motif
Pfam: AAA_23 SbcC_Walker_B SMC_N AAA_29 AAA_27 AAA_15 ABC_tran AAA_21 RsgA_GTPase
Other DBs
NCBI-ProteinID: WOQ70040
UniProt: A0AAU0MHG0
LinkDB
Position
423505..426531
AA seq 1008 aa
MRIHRIEVEGFGPFRQRQIVDIDEYADDGIFLISGRTGAGKSSLLDAICFALYGGVPRYD
GGEKRLRSDHCAPADATEVALEFTAGDARWRVERSPEYQRAKKNGTGMTTAAPQARLFRW
EDGGWQGVAARPRDVGEALHEILPLTQGQFLQVILLAQNRFARFLLAGGGERQALLRSLF
DSERFEQYEADLDERRRRSEARSSESVALLDRVLAEAERVSADLADDAEVDPEGGAVAGA
AGVATDPASRIAALERAVDRARYRAETTDNAVDAAAAAREAAETVHTRAERAREKQERRG
AARARLRGLEERDGSIDEARAELAAALRAEPVRTAATAADQARDAAIRADAAAEAALREA
SGAAIGIDLDADPVALRAAADERAGALPALREAAEAEQALPRRRDERDRLRAEDADRARD
EAAAVRRAAELDARIAEIDALLPALGEAAALAAAARADLVDAGERLAACAEAEECEALRA
QADARALARSAELDAANRELRTLREHRLRGNAADLAAQLVPGEPCAVCGATEHPQPAAAA
DDAVSDEQIDGAEQRLDAAMAALREANQAAAALAENAARARGRAGGETADAIRARRAEAL
TRVEAAEDAARRRDALTAEKASALDERRRLRELTDAFSAERADRASRIAVLDASIREQER
AVEAARGSAASAALRMAESESAVRHLRVLADARAEREARAALHGEALARLADALETAGFE
SADAAASALRSEQEREALAARVRGHEAALAAEKATLLELELEALPEEPVDTSETERARDD
ARAAWAAAVQAALAAEQLVTRLSQLLTDARAAHATLGALAEEHAVIVRLADTIAGRAPNT
HRMKLETFVLAAELEQIIAAANLRLADMSDGRYRLRHSDALAARGAASGLSIEVFDAYTG
LSRPAQSLSGGETFLASLALALGLAEVVTARAGGVRLDTLFIDEGFGSLDAETLETAMRT
LDELRQGGRTVGLISHVEAMREQIPAQLRVEALPGGPSLVHQTVRLEA
NT seq 3027 nt   +upstreamnt  +downstreamnt
gtgagaatccaccgcatcgaggtcgagggcttcggtccgttccggcagcgacagatcgtc
gacatcgacgagtacgccgacgacggcatcttcctcatctcggggcgcacgggcgcgggc
aagtcgagccttctggatgcgatctgcttcgcgctgtacgggggcgtgccgcgctacgac
ggaggcgagaagcgcctgcgcagcgaccactgcgcgcccgccgacgcgacggaggtcgcc
ctcgagttcacggccggcgacgcgcgctggcgcgtcgagcgctcgccggagtaccagagg
gcgaagaagaacggcacggggatgaccacggcggcgccccaggcgcgcttgttccggtgg
gaggacggcggctggcagggggtcgccgcgcgtccgcgcgacgtcggcgaggcgctgcac
gagatcctgccgctcacgcaggggcagttcctccaggtgatcctgctcgcgcagaaccgc
ttcgcccgcttcctcctcgccggcggcggcgagcgccaggccctgctgcgctcgctcttc
gacagcgagcgcttcgagcagtacgaggccgacctcgacgagcggcgcaggcgttccgag
gcccgctcgagcgagagcgtcgccctcctcgatcgcgtgctcgccgaggccgagcgggtg
tccgccgacctcgccgacgatgccgaggtcgatcccgagggcggcgccgtcgcgggtgcg
gccggtgtcgccaccgatccggcgtcgcgcatcgcggcgctcgagcgggcggtggaccgc
gcgcggtaccgcgccgagaccaccgacaacgccgtggatgccgcggccgccgcccgcgag
gccgccgagaccgtccacacccgcgccgagcgggcgcgcgagaagcaggagcgacgcggc
gccgcccgcgcgcggctgcgcgggctcgaggagcgggacggcagcatcgacgaggcccgg
gcggagctcgcggccgccctccgcgccgaacccgtccgcacggcggcgacggcggcagac
caggcgcgcgacgcggcgatccgcgccgacgcggcggcggaggcggcactccgcgaggcc
tcgggggccgcgatcggcatcgacctcgacgccgatcccgtggcgcttcgagcggccgcc
gacgagcgtgccggtgcgctgcccgccctgcgcgaggcggccgaggccgagcaggcgctc
ccacgtcgccgcgacgagcgcgaccgcctgcgcgccgaggacgccgaccgcgcgcgggac
gaggccgccgcggtgcggcgcgccgcggagctcgacgcgcgcatcgccgagatcgacgcc
ctgctgcccgctctgggcgaggcggcggcgctggccgccgcggcgcgagcagacctcgtc
gatgccggcgaacgcctcgccgcgtgcgccgaagcggaggagtgcgaggccctccgggcg
caggccgacgcccgggcgctggcgcgttccgccgagctcgacgccgccaaccgggagctg
cgcaccctgcgcgagcaccggctgcgcggcaacgcggccgacctcgccgcgcagctggtg
ccgggggagccctgcgcggtctgcggggcgaccgagcacccgcaaccggccgcggcggca
gacgatgccgtgtccgacgagcagatcgatggcgccgagcagcgcctggatgccgcgatg
gcggccctgcgcgaggcgaaccaggccgccgcggcgctggcggagaacgccgctcgcgcg
cgcgggcgcgccggcggcgagacggcagatgcgatccgcgcccgccgggcggaggccctg
acgcgcgtcgaggccgccgaggacgccgcgcgccggcgggacgcgctgacggcggagaag
gcgagtgcgctcgacgagcggcggcgactgcgcgagctgacggacgccttctcggccgag
cgcgccgaccgcgcgagccgcatcgcggtgctcgacgcgtcgatccgcgagcaggaacgc
gcggtcgaggccgcgcggggctccgccgcctccgccgccctgcggatggccgagagcgaa
tccgccgtgcggcacctgcgtgttctcgccgacgcgcgcgccgagcgggaggcgcgcgcc
gccctgcacggggaggcgctcgcgcggctcgccgacgcgctggagacggcggggttcgag
agcgcggatgccgcggcatccgcgctgcggagcgagcaggagcgggaggcgctggccgct
cgcgtgcgcggccacgaggcggccctcgcggcggagaaggcgacgctgctggagctggag
ctggaggcgctgccggaggagccggtcgacacgtccgagacggagcgggcccgggacgac
gcgagggcggcgtgggccgcggcggtgcaggccgccctcgcggcagagcagctggtgacg
cgtctgtcgcagctgctgaccgacgcgcgcgccgcgcacgcgacgctcggggcgctcgcg
gaggagcacgccgtcatcgtgcggctcgccgacaccatcgccgggcgcgcccccaacacg
caccgcatgaagctcgagaccttcgtgctcgcggccgagctcgagcagatcatcgcggcc
gcgaacctgcggctggccgacatgtccgacgggcgctaccgcctgcggcacagcgacgcg
ctggccgcgcgcggcgccgcctcggggctgtcgatcgaggtgttcgacgcctatacgggg
ctctcgcgacccgcgcagtcgctctccgggggcgagacgttcctcgcctccctcgccctc
gccctcggtcttgccgaagtggtcaccgcgcgggcgggcggcgtgcggctggacaccctc
ttcatcgacgagggcttcggctcgctcgacgcggagaccctcgagacggcgatgcgcacg
ctcgacgagctgcgccaggggggccgcaccgtgggcctcatcagccacgtcgaggcgatg
cgcgagcagatccccgcgcagctgagggtcgaggcgctccccggcggcccgagtctcgtg
caccagacggttaggcttgaggcatga

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