Microbacterium limosum: RYJ27_02090
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Entry
RYJ27_02090 CDS
T09965
Name
(GenBank) SMC family ATPase
KO
K03546
DNA repair protein SbcC/Rad50
Organism
mliy
Microbacterium limosum
Brite
KEGG Orthology (KO) [BR:
mliy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mliy03400
]
RYJ27_02090
DNA repair and recombination proteins [BR:
mliy03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
RYJ27_02090
Archaeal homologous recombinant proteins
RYJ27_02090
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
SMC_N
AAA_29
AAA_27
AAA_15
ABC_tran
AAA_21
RsgA_GTPase
Motif
Other DBs
NCBI-ProteinID:
WOQ70040
UniProt:
A0AAU0MHG0
LinkDB
All DBs
Position
423505..426531
Genome browser
AA seq
1008 aa
AA seq
DB search
MRIHRIEVEGFGPFRQRQIVDIDEYADDGIFLISGRTGAGKSSLLDAICFALYGGVPRYD
GGEKRLRSDHCAPADATEVALEFTAGDARWRVERSPEYQRAKKNGTGMTTAAPQARLFRW
EDGGWQGVAARPRDVGEALHEILPLTQGQFLQVILLAQNRFARFLLAGGGERQALLRSLF
DSERFEQYEADLDERRRRSEARSSESVALLDRVLAEAERVSADLADDAEVDPEGGAVAGA
AGVATDPASRIAALERAVDRARYRAETTDNAVDAAAAAREAAETVHTRAERAREKQERRG
AARARLRGLEERDGSIDEARAELAAALRAEPVRTAATAADQARDAAIRADAAAEAALREA
SGAAIGIDLDADPVALRAAADERAGALPALREAAEAEQALPRRRDERDRLRAEDADRARD
EAAAVRRAAELDARIAEIDALLPALGEAAALAAAARADLVDAGERLAACAEAEECEALRA
QADARALARSAELDAANRELRTLREHRLRGNAADLAAQLVPGEPCAVCGATEHPQPAAAA
DDAVSDEQIDGAEQRLDAAMAALREANQAAAALAENAARARGRAGGETADAIRARRAEAL
TRVEAAEDAARRRDALTAEKASALDERRRLRELTDAFSAERADRASRIAVLDASIREQER
AVEAARGSAASAALRMAESESAVRHLRVLADARAEREARAALHGEALARLADALETAGFE
SADAAASALRSEQEREALAARVRGHEAALAAEKATLLELELEALPEEPVDTSETERARDD
ARAAWAAAVQAALAAEQLVTRLSQLLTDARAAHATLGALAEEHAVIVRLADTIAGRAPNT
HRMKLETFVLAAELEQIIAAANLRLADMSDGRYRLRHSDALAARGAASGLSIEVFDAYTG
LSRPAQSLSGGETFLASLALALGLAEVVTARAGGVRLDTLFIDEGFGSLDAETLETAMRT
LDELRQGGRTVGLISHVEAMREQIPAQLRVEALPGGPSLVHQTVRLEA
NT seq
3027 nt
NT seq
+upstream
nt +downstream
nt
gtgagaatccaccgcatcgaggtcgagggcttcggtccgttccggcagcgacagatcgtc
gacatcgacgagtacgccgacgacggcatcttcctcatctcggggcgcacgggcgcgggc
aagtcgagccttctggatgcgatctgcttcgcgctgtacgggggcgtgccgcgctacgac
ggaggcgagaagcgcctgcgcagcgaccactgcgcgcccgccgacgcgacggaggtcgcc
ctcgagttcacggccggcgacgcgcgctggcgcgtcgagcgctcgccggagtaccagagg
gcgaagaagaacggcacggggatgaccacggcggcgccccaggcgcgcttgttccggtgg
gaggacggcggctggcagggggtcgccgcgcgtccgcgcgacgtcggcgaggcgctgcac
gagatcctgccgctcacgcaggggcagttcctccaggtgatcctgctcgcgcagaaccgc
ttcgcccgcttcctcctcgccggcggcggcgagcgccaggccctgctgcgctcgctcttc
gacagcgagcgcttcgagcagtacgaggccgacctcgacgagcggcgcaggcgttccgag
gcccgctcgagcgagagcgtcgccctcctcgatcgcgtgctcgccgaggccgagcgggtg
tccgccgacctcgccgacgatgccgaggtcgatcccgagggcggcgccgtcgcgggtgcg
gccggtgtcgccaccgatccggcgtcgcgcatcgcggcgctcgagcgggcggtggaccgc
gcgcggtaccgcgccgagaccaccgacaacgccgtggatgccgcggccgccgcccgcgag
gccgccgagaccgtccacacccgcgccgagcgggcgcgcgagaagcaggagcgacgcggc
gccgcccgcgcgcggctgcgcgggctcgaggagcgggacggcagcatcgacgaggcccgg
gcggagctcgcggccgccctccgcgccgaacccgtccgcacggcggcgacggcggcagac
caggcgcgcgacgcggcgatccgcgccgacgcggcggcggaggcggcactccgcgaggcc
tcgggggccgcgatcggcatcgacctcgacgccgatcccgtggcgcttcgagcggccgcc
gacgagcgtgccggtgcgctgcccgccctgcgcgaggcggccgaggccgagcaggcgctc
ccacgtcgccgcgacgagcgcgaccgcctgcgcgccgaggacgccgaccgcgcgcgggac
gaggccgccgcggtgcggcgcgccgcggagctcgacgcgcgcatcgccgagatcgacgcc
ctgctgcccgctctgggcgaggcggcggcgctggccgccgcggcgcgagcagacctcgtc
gatgccggcgaacgcctcgccgcgtgcgccgaagcggaggagtgcgaggccctccgggcg
caggccgacgcccgggcgctggcgcgttccgccgagctcgacgccgccaaccgggagctg
cgcaccctgcgcgagcaccggctgcgcggcaacgcggccgacctcgccgcgcagctggtg
ccgggggagccctgcgcggtctgcggggcgaccgagcacccgcaaccggccgcggcggca
gacgatgccgtgtccgacgagcagatcgatggcgccgagcagcgcctggatgccgcgatg
gcggccctgcgcgaggcgaaccaggccgccgcggcgctggcggagaacgccgctcgcgcg
cgcgggcgcgccggcggcgagacggcagatgcgatccgcgcccgccgggcggaggccctg
acgcgcgtcgaggccgccgaggacgccgcgcgccggcgggacgcgctgacggcggagaag
gcgagtgcgctcgacgagcggcggcgactgcgcgagctgacggacgccttctcggccgag
cgcgccgaccgcgcgagccgcatcgcggtgctcgacgcgtcgatccgcgagcaggaacgc
gcggtcgaggccgcgcggggctccgccgcctccgccgccctgcggatggccgagagcgaa
tccgccgtgcggcacctgcgtgttctcgccgacgcgcgcgccgagcgggaggcgcgcgcc
gccctgcacggggaggcgctcgcgcggctcgccgacgcgctggagacggcggggttcgag
agcgcggatgccgcggcatccgcgctgcggagcgagcaggagcgggaggcgctggccgct
cgcgtgcgcggccacgaggcggccctcgcggcggagaaggcgacgctgctggagctggag
ctggaggcgctgccggaggagccggtcgacacgtccgagacggagcgggcccgggacgac
gcgagggcggcgtgggccgcggcggtgcaggccgccctcgcggcagagcagctggtgacg
cgtctgtcgcagctgctgaccgacgcgcgcgccgcgcacgcgacgctcggggcgctcgcg
gaggagcacgccgtcatcgtgcggctcgccgacaccatcgccgggcgcgcccccaacacg
caccgcatgaagctcgagaccttcgtgctcgcggccgagctcgagcagatcatcgcggcc
gcgaacctgcggctggccgacatgtccgacgggcgctaccgcctgcggcacagcgacgcg
ctggccgcgcgcggcgccgcctcggggctgtcgatcgaggtgttcgacgcctatacgggg
ctctcgcgacccgcgcagtcgctctccgggggcgagacgttcctcgcctccctcgccctc
gccctcggtcttgccgaagtggtcaccgcgcgggcgggcggcgtgcggctggacaccctc
ttcatcgacgagggcttcggctcgctcgacgcggagaccctcgagacggcgatgcgcacg
ctcgacgagctgcgccaggggggccgcaccgtgggcctcatcagccacgtcgaggcgatg
cgcgagcagatccccgcgcagctgagggtcgaggcgctccccggcggcccgagtctcgtg
caccagacggttaggcttgaggcatga
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