Microbacterium limosum: RYJ27_03645
Help
Entry
RYJ27_03645 CDS
T09965
Name
(GenBank) ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
mliy
Microbacterium limosum
Pathway
mliy03420
Nucleotide excision repair
mliy03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mliy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
RYJ27_03645
03430 Mismatch repair
RYJ27_03645
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mliy03400
]
RYJ27_03645
Enzymes [BR:
mliy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
RYJ27_03645
DNA repair and recombination proteins [BR:
mliy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
RYJ27_03645
MMR (mismatch excision repair)
Other MMR factors
RYJ27_03645
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PDDEXK_1
UvrD_C_2
AAA_30
Viral_helicase1
Motif
Other DBs
NCBI-ProteinID:
WOQ70316
UniProt:
A0AAU0MJI8
LinkDB
All DBs
Position
749466..752900
Genome browser
AA seq
1144 aa
AA seq
DB search
MTSPTQGGPRVSAHAIAAALGQFPPTDEQAEVIESPLRPALVVAGAGSGKTETMASRVVW
LVANGLVRRDEVLGLTFTRKAAGELGERIRRRLERLSEFEERGLLARLGALHTEGALEEF
ARIERRAEQERDAASRAGRDTAPIELRARAARTAALDRLAPVAVRVEGGDLLQRPTVATY
NSFADQIVRENAVLLGRDADAAVLSESAAWLLMRRVVLSSDDERLEHRTEAMSTIIDGAL
RVARDAVDNLVETDRLRTMAAEFADVLERPSEKRLPDGVYRDVRVAAEKVSGLAVLADLA
DAYAAEKARRGVLDFSDQVAGALRIVRAHAAVGHELRRRYRVVLLDEYQDTSVVQTLLLS
ELFGGEAVMAVGDPHQSIYGWRGASAGNLGGFARAFGRGGSTGEHALMTSWRNSDVVLRA
ANAVLAPLAASSPVPVRPLRPRPGVTAGRLEVAFENDVDAEADAVAAWFEAVRAERTAQG
RSTRGAILFRGKKHMQRFADALAARGIPRHILGLGGLLSTPEVVDVVSVLRVVDDPTAGS
ALIRVLSGPRFAVGLADLRLLEKLARRLASHDHTLAPLEPAVADAVRTGAGADQPGSIVE
ALDFVGRARDDHGWLRDFSPAARERLREAAAMFRGLRQAAALPIPELVRMIELELRLDIE
LAANEAHGPARIASAQLRAFTDEVHAFLAADDRGTVRSLIAWLDHAEQLDEFAPRTEPPE
DDVVQLLTIHGSKGLEWDAVAVARVVEGELPVAPRDTKAWLGFGVLPYDFRGDAEWLPRL
AWRAHDAPTQQALNAAIAEFVEAGKTRQRDEERRLAYVAITRAREHLLLSGSSWAGGQKP
REPAPYLAEIAAALGVDHVRPEPGENPFEGDRRIITWPMDPLGEAPRTRRPRVAAAAAAV
AAAAERPPIEASRDLALLLAERRSRGGDAPEPPVRVPASRFKDWVGDYEGTLRRIARPMP
ERPYRQTRIGTLFHAWVEQRSGAGGRGPSLDDALWELDDDEAEASSASDDDAARLEALKG
VFEASEWGPLAPVEVESEIDFVLRGTRGAAHVVICKLDAVYRRDGRYEIVDWKTGRPPAS
DAEREERMLQLALYRLAYHRARGVPLEEIDVALYYIADDLVIRGEGSYSEEDLAQRWNAA
REAR
NT seq
3435 nt
NT seq
+upstream
nt +downstream
nt
gtgacctcccccacgcagggtgggccgcgggtgtcggctcacgcgatcgccgccgcgctc
ggccagttcccgcccaccgacgagcaggcggaggtcatcgagtctccgctgcgccccgcc
ctcgtcgtggcgggtgcgggcagcggcaagacggagacgatggcctcgcgggtcgtctgg
ctcgtggccaacgggctcgtccgtcgagacgaggttctcgggctgaccttcacacggaag
gccgcgggggagctcggcgagcggatccgccggcggctcgagcggttgtccgagttcgag
gagcgcggcctcctggcgcgcctcggcgcgttgcacacggagggcgcgctggaggagttc
gcgcgcatcgaacgccgcgcggagcaggagcgcgacgcggcgtcccgcgccggccgcgac
accgcgccgatcgagctccgggcgcgggcggcgcggacggcggcgctggatcgtctcgcg
ccggtcgccgtccgcgtggagggaggggatctgctgcagcggcccaccgtcgcgacgtac
aacagcttcgccgatcagatcgtgcgggagaacgcggtgctgctcgggcgcgacgccgat
gcggccgtgctctcggagtccgccgcgtggctgctgatgcgccgcgtcgtgctctcgagc
gacgacgagcgtctcgagcaccgcacggaggcgatgtcgacgatcatcgacggcgcgctc
cgcgtcgcgcgcgacgccgtcgacaatctcgtcgagaccgatcgcctccgcacgatggcc
gcggagttcgcggacgtgctcgaacgcccgagcgaaaagcgtctgcccgacggggtgtac
cgcgacgtgcgggtcgctgcggagaaggtgtcggggctcgcggtgctcgccgacctcgcc
gacgcgtatgcggccgagaaggcgcgacgcggggtgctcgacttctccgatcaggtcgcg
ggggcgctgcgcatcgtgcgggcccacgcggccgtggggcacgagctgcggcgccgctac
cgcgtcgtcctgctcgacgagtatcaggacacgtccgtcgtgcagacgctgctgctgtcc
gagctcttcggcggcgaggcggtcatggccgtcggcgaccctcatcagtcgatctacggg
tggcggggcgcgagcgccgggaacctcggcggcttcgcgcgcgccttcggtcgcggggga
tcgacgggggagcacgccctcatgaccagctggcgcaacagcgatgtcgtgctgcgcgcc
gccaacgccgtcctcgcgccgctcgccgcctccagccccgtgcccgtccgtcccctccgg
ccccgtccgggggtcacggcggggcgcctggaggtcgccttcgagaacgacgtggacgcc
gaggcggatgccgtcgccgcatggttcgaggcggtgcgcgccgagcgcaccgcgcagggg
cgctccacgcgcggcgcgatcctcttccgcgggaagaagcacatgcagcggttcgcggac
gccctggccgcgcgcggcatcccgcgtcacatcctcggcctcggcgggctgctctccacg
cccgaggtggtggatgtcgtgagtgtcctgcgcgtcgtcgacgacccgaccgcgggatcg
gcgctcatccgcgtcctctccggcccgaggttcgcggtggggctcgccgacctgcggctg
ctcgagaagctcgcgcgacgcctggcgagccacgaccacacgctcgcgccactcgagccg
gccgtcgcggacgccgtccgcacgggtgcgggcgcggaccagcccgggtcgatcgtcgag
gcgctcgacttcgtcgggcgcgcgcgcgacgaccacggctggctgcgggatttctcaccc
gcggcgcgcgaacgcctgcgcgaggctgcggcgatgttccggggactccgccaggccgcg
gctctgccgatccccgaactcgtgcggatgatcgagctcgaactgcggctcgacatcgaa
ctcgccgcgaacgaggcccacgggccggcgcggatcgcctcggcgcagcttcgcgccttc
accgacgaggtgcacgctttcctcgccgccgatgaccggggcacggtgcgcagcctgatc
gcctggctcgaccacgccgagcagctggacgagttcgcgccgcgcaccgaaccccccgag
gacgacgtcgtgcagctgctcacgatccacggttcgaaggggctggagtgggatgccgtc
gccgtcgcccgcgtcgtcgagggcgagctcccggtcgcaccccgcgacacgaaggcctgg
ctcggcttcggggtgctgccctacgacttccgcggcgacgcggagtggctgccgcgcctg
gcgtggcgtgcgcacgacgccccgacgcagcaggcgctgaacgccgcgatcgccgagttc
gtcgaggcgggaaagacccgccagcgcgacgaggaacggcgcctcgcctacgtcgcgatc
acgagggcgcgggagcacctgctgctgtcgggctcctcctgggcgggtgggcagaagccg
agggagcccgccccgtacctggcggagatcgccgcggccctgggcgtcgatcatgtgcgg
cccgagccgggcgagaaccccttcgagggcgaccgacgcatcatcacgtggccgatggac
cccctcggcgaggctccccgcacgcgtcgtccgcgcgtggcggcggcggcggcggcggtc
gcggcggcggcggaacggccgccgatcgaggcgtcccgcgacctcgcgctcctcctcgca
gagcgtcgctcccgcggcggggatgcgccggagccgccggtcagggtaccggcgtcccga
ttcaaggactgggtcggcgactacgaagggacgctgcggcgcatcgcgcgtccgatgccc
gagcgcccctaccgccagacccggatcggcacgctcttccacgcatgggtggagcagcgt
tcgggtgcgggcggacgcgggccttcgttggacgacgccctgtgggagctcgacgacgac
gaggccgaggcctcctcggcctccgacgacgatgctgcgcggctcgaggcgctcaagggc
gtcttcgaagcgtccgaatgggggccgctcgcccccgtcgaggtcgagtcggagatcgac
ttcgttctccgcggcacccggggcgcagcgcacgtcgtgatctgcaagctcgacgccgtc
taccggcgcgatggccggtacgagatcgtcgactggaagaccggacgcccgcccgcatcc
gatgccgagcgggaggagcggatgctgcagctcgcgctgtaccgcctggcctaccaccgg
gcgcgcggcgtccccctcgaggagatcgacgtggcgctctactacatcgccgacgacctc
gtgatccgcggggagggctcctactcggaggaggacctggcccagcgctggaatgcggcg
cgggaggcccgctga
DBGET
integrated database retrieval system
